Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV13-2A0A0B4J235 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 NARF-205ENST00000412079 1760 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV13-2A0A0B4J235 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-2A0A0B4J235 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-2A0A0B4J235 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-2A0A0B4J235 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-2A0A0B4J235 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV13-2A0A0B4J235 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV13-2A0A0B4J235 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV13-2A0A0B4J235 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
TRAV13-2A0A0B4J235 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-2A0A0B4J235 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-2A0A0B4J235 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-2A0A0B4J235 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-2A0A0B4J235 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV13-2A0A0B4J235 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms