Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGB1Q9Y5G3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHGB1Q9Y5G3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGB1Q9Y5G3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDHGB1Q9Y5G3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHGB1Q9Y5G3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGB1Q9Y5G3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHGB1Q9Y5G3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGB1Q9Y5G3 DRD5P2-201ENST00000421395 2012 ntBASIC23.98■■□□□ 1.43
PCDHGB1Q9Y5G3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGB1Q9Y5G3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGB1Q9Y5G3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGB1Q9Y5G3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGB1Q9Y5G3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGB1Q9Y5G3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGB1Q9Y5G3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGB1Q9Y5G3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGB1Q9Y5G3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGB1Q9Y5G3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGB1Q9Y5G3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGB1Q9Y5G3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGB1Q9Y5G3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.93■■□□□ 1.42
PCDHGB1Q9Y5G3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
PCDHGB1Q9Y5G3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
PCDHGB1Q9Y5G3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PCDHGB1Q9Y5G3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
PCDHGB1Q9Y5G3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGB1Q9Y5G3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGB1Q9Y5G3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGB1Q9Y5G3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDHGB1Q9Y5G3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.91■■□□□ 1.42
PCDHGB1Q9Y5G3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGB1Q9Y5G3 AL139393.2-201ENST00000608721 2025 ntBASIC23.91■■□□□ 1.42
PCDHGB1Q9Y5G3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGB1Q9Y5G3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGB1Q9Y5G3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGB1Q9Y5G3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGB1Q9Y5G3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGB1Q9Y5G3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PCDHGB1Q9Y5G3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGB1Q9Y5G3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.88■■□□□ 1.41
PCDHGB1Q9Y5G3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGB1Q9Y5G3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGB1Q9Y5G3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGB1Q9Y5G3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGB1Q9Y5G3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGB1Q9Y5G3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PCDHGB1Q9Y5G3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGB1Q9Y5G3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGB1Q9Y5G3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGB1Q9Y5G3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PCDHGB1Q9Y5G3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHGB1Q9Y5G3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGB1Q9Y5G3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHGB1Q9Y5G3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
PCDHGB1Q9Y5G3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PCDHGB1Q9Y5G3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGB1Q9Y5G3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB1Q9Y5G3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.82■■□□□ 1.4
PCDHGB1Q9Y5G3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
PCDHGB1Q9Y5G3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB1Q9Y5G3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGB1Q9Y5G3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGB1Q9Y5G3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
PCDHGB1Q9Y5G3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDHGB1Q9Y5G3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGB1Q9Y5G3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGB1Q9Y5G3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
PCDHGB1Q9Y5G3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGB1Q9Y5G3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGB1Q9Y5G3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGB1Q9Y5G3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGB1Q9Y5G3 DYNLL1-208ENST00000550178 581 ntBASIC23.77■■□□□ 1.4
PCDHGB1Q9Y5G3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGB1Q9Y5G3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGB1Q9Y5G3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGB1Q9Y5G3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGB1Q9Y5G3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGB1Q9Y5G3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHGB1Q9Y5G3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PCDHGB1Q9Y5G3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB1Q9Y5G3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB1Q9Y5G3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB1Q9Y5G3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.72■■□□□ 1.39
PCDHGB1Q9Y5G3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB1Q9Y5G3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGB1Q9Y5G3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
PCDHGB1Q9Y5G3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGB1Q9Y5G3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGB1Q9Y5G3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHGB1Q9Y5G3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHGB1Q9Y5G3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGB1Q9Y5G3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGB1Q9Y5G3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGB1Q9Y5G3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGB1Q9Y5G3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
PCDHGB1Q9Y5G3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHGB1Q9Y5G3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGB1Q9Y5G3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGB1Q9Y5G3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 233.7 ms