Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC142086.6-201ENST00000621154 1765 ntBASIC20.93■□□□□ 0.94
LSM4Q9Y4Z0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.93■□□□□ 0.94
LSM4Q9Y4Z0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSM4Q9Y4Z0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LSM4Q9Y4Z0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LSM4Q9Y4Z0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSM4Q9Y4Z0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSM4Q9Y4Z0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSM4Q9Y4Z0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSM4Q9Y4Z0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.91■□□□□ 0.94
LSM4Q9Y4Z0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.9■□□□□ 0.94
LSM4Q9Y4Z0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LSM4Q9Y4Z0 AL391121.1-201ENST00000607967 1349 ntBASIC20.9■□□□□ 0.94
LSM4Q9Y4Z0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSM4Q9Y4Z0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.9■□□□□ 0.94
LSM4Q9Y4Z0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSM4Q9Y4Z0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.9■□□□□ 0.94
LSM4Q9Y4Z0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.89■□□□□ 0.94
LSM4Q9Y4Z0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LSM4Q9Y4Z0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSM4Q9Y4Z0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSM4Q9Y4Z0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM4Q9Y4Z0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM4Q9Y4Z0 AL162393.1-201ENST00000437852 946 ntBASIC20.88■□□□□ 0.93
LSM4Q9Y4Z0 AP006261.1-201ENST00000584783 668 ntBASIC20.88■□□□□ 0.93
LSM4Q9Y4Z0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM4Q9Y4Z0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM4Q9Y4Z0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM4Q9Y4Z0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM4Q9Y4Z0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.87■□□□□ 0.93
LSM4Q9Y4Z0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LSM4Q9Y4Z0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM4Q9Y4Z0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM4Q9Y4Z0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM4Q9Y4Z0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LSM4Q9Y4Z0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LSM4Q9Y4Z0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.86■□□□□ 0.93
LSM4Q9Y4Z0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSM4Q9Y4Z0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.85■□□□□ 0.93
LSM4Q9Y4Z0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LSM4Q9Y4Z0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LSM4Q9Y4Z0 AL133380.1-201ENST00000506013 324 ntBASIC20.85■□□□□ 0.93
LSM4Q9Y4Z0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM4Q9Y4Z0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.85■□□□□ 0.93
LSM4Q9Y4Z0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM4Q9Y4Z0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LSM4Q9Y4Z0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM4Q9Y4Z0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM4Q9Y4Z0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM4Q9Y4Z0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LSM4Q9Y4Z0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM4Q9Y4Z0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM4Q9Y4Z0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM4Q9Y4Z0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LSM4Q9Y4Z0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LSM4Q9Y4Z0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LSM4Q9Y4Z0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM4Q9Y4Z0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LSM4Q9Y4Z0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.79■□□□□ 0.92
LSM4Q9Y4Z0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LSM4Q9Y4Z0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LSM4Q9Y4Z0 AL139393.2-201ENST00000608721 2025 ntBASIC20.78■□□□□ 0.92
LSM4Q9Y4Z0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.78■□□□□ 0.92
LSM4Q9Y4Z0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LSM4Q9Y4Z0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LSM4Q9Y4Z0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LSM4Q9Y4Z0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LSM4Q9Y4Z0 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.76■□□□□ 0.91
LSM4Q9Y4Z0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LSM4Q9Y4Z0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LSM4Q9Y4Z0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LSM4Q9Y4Z0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
LSM4Q9Y4Z0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LSM4Q9Y4Z0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.72■□□□□ 0.91
LSM4Q9Y4Z0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LSM4Q9Y4Z0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LSM4Q9Y4Z0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LSM4Q9Y4Z0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LSM4Q9Y4Z0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.71■□□□□ 0.91
LSM4Q9Y4Z0 DRD5P2-201ENST00000421395 2012 ntBASIC20.71■□□□□ 0.91
LSM4Q9Y4Z0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
LSM4Q9Y4Z0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LSM4Q9Y4Z0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
LSM4Q9Y4Z0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSM4Q9Y4Z0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LSM4Q9Y4Z0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.69■□□□□ 0.9
LSM4Q9Y4Z0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
LSM4Q9Y4Z0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LSM4Q9Y4Z0 MIR3665-201ENST00000578708 105 ntBASIC20.69■□□□□ 0.9
LSM4Q9Y4Z0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
LSM4Q9Y4Z0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.69■□□□□ 0.9
LSM4Q9Y4Z0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSM4Q9Y4Z0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LSM4Q9Y4Z0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LSM4Q9Y4Z0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.67■□□□□ 0.9
LSM4Q9Y4Z0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSM4Q9Y4Z0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LSM4Q9Y4Z0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.67■□□□□ 0.9
LSM4Q9Y4Z0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSM4Q9Y4Z0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms