Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
LINC00588Q9Y4M8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00588Q9Y4M8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00588Q9Y4M8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.14■□□□□ 0.49
LINC00588Q9Y4M8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LINC00588Q9Y4M8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00588Q9Y4M8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
LINC00588Q9Y4M8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00588Q9Y4M8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00588Q9Y4M8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.12■□□□□ 0.49
LINC00588Q9Y4M8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00588Q9Y4M8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00588Q9Y4M8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00588Q9Y4M8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00588Q9Y4M8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00588Q9Y4M8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00588Q9Y4M8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LINC00588Q9Y4M8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00588Q9Y4M8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00588Q9Y4M8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.08■□□□□ 0.49
LINC00588Q9Y4M8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00588Q9Y4M8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
LINC00588Q9Y4M8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.08■□□□□ 0.48
LINC00588Q9Y4M8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00588Q9Y4M8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00588Q9Y4M8 AC010864.1-201ENST00000609407 1511 ntBASIC18.08■□□□□ 0.48
LINC00588Q9Y4M8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LINC00588Q9Y4M8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00588Q9Y4M8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.06■□□□□ 0.48
LINC00588Q9Y4M8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00588Q9Y4M8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00588Q9Y4M8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC00588Q9Y4M8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LINC00588Q9Y4M8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00588Q9Y4M8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00588Q9Y4M8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LINC00588Q9Y4M8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00588Q9Y4M8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.03■□□□□ 0.48
LINC00588Q9Y4M8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LINC00588Q9Y4M8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00588Q9Y4M8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LINC00588Q9Y4M8 HLA-V-202ENST00000446817 847 ntBASIC18.02■□□□□ 0.48
LINC00588Q9Y4M8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
LINC00588Q9Y4M8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC00588Q9Y4M8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00588Q9Y4M8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00588Q9Y4M8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.01■□□□□ 0.47
LINC00588Q9Y4M8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC00588Q9Y4M8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18■□□□□ 0.47
LINC00588Q9Y4M8 LINC01971-201ENST00000617888 1048 ntBASIC18■□□□□ 0.47
LINC00588Q9Y4M8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
LINC00588Q9Y4M8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.99■□□□□ 0.47
LINC00588Q9Y4M8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC17.99■□□□□ 0.47
LINC00588Q9Y4M8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LINC00588Q9Y4M8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00588Q9Y4M8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.98■□□□□ 0.47
LINC00588Q9Y4M8 AL135925.1-201ENST00000605920 1701 ntBASIC17.98■□□□□ 0.47
LINC00588Q9Y4M8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.97■□□□□ 0.47
LINC00588Q9Y4M8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC00588Q9Y4M8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
LINC00588Q9Y4M8 DUX4L11-201ENST00000611504 1267 ntBASIC17.96■□□□□ 0.47
LINC00588Q9Y4M8 DUX4L12-201ENST00000614593 1267 ntBASIC17.96■□□□□ 0.47
LINC00588Q9Y4M8 DUX4L14-201ENST00000621227 1267 ntBASIC17.96■□□□□ 0.47
LINC00588Q9Y4M8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00588Q9Y4M8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.94■□□□□ 0.46
LINC00588Q9Y4M8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.94■□□□□ 0.46
LINC00588Q9Y4M8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.94■□□□□ 0.46
LINC00588Q9Y4M8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00588Q9Y4M8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC00588Q9Y4M8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC00588Q9Y4M8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.93■□□□□ 0.46
LINC00588Q9Y4M8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC00588Q9Y4M8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00588Q9Y4M8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00588Q9Y4M8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00588Q9Y4M8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00588Q9Y4M8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00588Q9Y4M8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LINC00588Q9Y4M8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00588Q9Y4M8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00588Q9Y4M8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC17.91■□□□□ 0.46
LINC00588Q9Y4M8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.91■□□□□ 0.46
LINC00588Q9Y4M8 MIR3648-2-201ENST00000581792 180 ntBASIC17.91■□□□□ 0.46
LINC00588Q9Y4M8 MIR3648-1-201ENST00000615959 180 ntBASIC17.91■□□□□ 0.46
LINC00588Q9Y4M8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.91■□□□□ 0.46
LINC00588Q9Y4M8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00588Q9Y4M8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00588Q9Y4M8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC00588Q9Y4M8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00588Q9Y4M8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00588Q9Y4M8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.9■□□□□ 0.46
LINC00588Q9Y4M8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC00588Q9Y4M8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC00588Q9Y4M8 AC016575.1-201ENST00000607026 382 ntBASIC17.89■□□□□ 0.45
LINC00588Q9Y4M8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00588Q9Y4M8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00588Q9Y4M8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00588Q9Y4M8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.88■□□□□ 0.45
LINC00588Q9Y4M8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LINC00588Q9Y4M8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms