Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.55■■□□□ 1.36
CLCF1Q9UBD9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.54■■□□□ 1.36
CLCF1Q9UBD9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CLCF1Q9UBD9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLCF1Q9UBD9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.52■■□□□ 1.36
CLCF1Q9UBD9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.52■■□□□ 1.36
CLCF1Q9UBD9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CLCF1Q9UBD9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
CLCF1Q9UBD9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CLCF1Q9UBD9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CLCF1Q9UBD9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
CLCF1Q9UBD9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CLCF1Q9UBD9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.49■■□□□ 1.35
CLCF1Q9UBD9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CLCF1Q9UBD9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
CLCF1Q9UBD9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.48■■□□□ 1.35
CLCF1Q9UBD9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CLCF1Q9UBD9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CLCF1Q9UBD9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
CLCF1Q9UBD9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CLCF1Q9UBD9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
CLCF1Q9UBD9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.46■■□□□ 1.35
CLCF1Q9UBD9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CLCF1Q9UBD9 AC010864.1-201ENST00000609407 1511 ntBASIC23.46■■□□□ 1.35
CLCF1Q9UBD9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CLCF1Q9UBD9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
CLCF1Q9UBD9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.45■■□□□ 1.34
CLCF1Q9UBD9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.44■■□□□ 1.34
CLCF1Q9UBD9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CLCF1Q9UBD9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.42■■□□□ 1.34
CLCF1Q9UBD9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CLCF1Q9UBD9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.42■■□□□ 1.34
CLCF1Q9UBD9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
CLCF1Q9UBD9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CLCF1Q9UBD9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CLCF1Q9UBD9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLCF1Q9UBD9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLCF1Q9UBD9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLCF1Q9UBD9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CLCF1Q9UBD9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
CLCF1Q9UBD9 LINC01971-201ENST00000617888 1048 ntBASIC23.38■■□□□ 1.33
CLCF1Q9UBD9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLCF1Q9UBD9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.36■■□□□ 1.33
CLCF1Q9UBD9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLCF1Q9UBD9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CLCF1Q9UBD9 HLA-V-202ENST00000446817 847 ntBASIC23.35■■□□□ 1.33
CLCF1Q9UBD9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CLCF1Q9UBD9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
CLCF1Q9UBD9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.34■■□□□ 1.33
CLCF1Q9UBD9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.34■■□□□ 1.33
CLCF1Q9UBD9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.34■■□□□ 1.33
CLCF1Q9UBD9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
CLCF1Q9UBD9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.33■■□□□ 1.33
CLCF1Q9UBD9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLCF1Q9UBD9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.32■■□□□ 1.32
CLCF1Q9UBD9 DUX4L11-201ENST00000611504 1267 ntBASIC23.32■■□□□ 1.32
CLCF1Q9UBD9 DUX4L12-201ENST00000614593 1267 ntBASIC23.32■■□□□ 1.32
CLCF1Q9UBD9 DUX4L14-201ENST00000621227 1267 ntBASIC23.32■■□□□ 1.32
CLCF1Q9UBD9 AL135925.1-201ENST00000605920 1701 ntBASIC23.32■■□□□ 1.32
CLCF1Q9UBD9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCF1Q9UBD9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.3■■□□□ 1.32
CLCF1Q9UBD9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CLCF1Q9UBD9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.29■■□□□ 1.32
CLCF1Q9UBD9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCF1Q9UBD9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCF1Q9UBD9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCF1Q9UBD9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCF1Q9UBD9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLCF1Q9UBD9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLCF1Q9UBD9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLCF1Q9UBD9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.27■■□□□ 1.32
CLCF1Q9UBD9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.27■■□□□ 1.32
CLCF1Q9UBD9 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.27■■□□□ 1.32
CLCF1Q9UBD9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCF1Q9UBD9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.26■■□□□ 1.31
CLCF1Q9UBD9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.25■■□□□ 1.31
CLCF1Q9UBD9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.25■■□□□ 1.31
CLCF1Q9UBD9 MIR3648-2-201ENST00000581792 180 ntBASIC23.25■■□□□ 1.31
CLCF1Q9UBD9 MIR3648-1-201ENST00000615959 180 ntBASIC23.25■■□□□ 1.31
CLCF1Q9UBD9 LINC00273-201ENST00000539813 1452 ntBASIC23.24■■□□□ 1.31
CLCF1Q9UBD9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLCF1Q9UBD9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CLCF1Q9UBD9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.24■■□□□ 1.31
CLCF1Q9UBD9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.24■■□□□ 1.31
CLCF1Q9UBD9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.24■■□□□ 1.31
CLCF1Q9UBD9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CLCF1Q9UBD9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCF1Q9UBD9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.23■■□□□ 1.31
CLCF1Q9UBD9 CR559946.2-201ENST00000623684 991 ntBASIC23.23■■□□□ 1.31
CLCF1Q9UBD9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.23■■□□□ 1.31
CLCF1Q9UBD9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCF1Q9UBD9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLCF1Q9UBD9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLCF1Q9UBD9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLCF1Q9UBD9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.22■■□□□ 1.31
CLCF1Q9UBD9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLCF1Q9UBD9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.22■■□□□ 1.31
CLCF1Q9UBD9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CLCF1Q9UBD9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CLCF1Q9UBD9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms