Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
LIN7CQ9NUP9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LIN7CQ9NUP9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LIN7CQ9NUP9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.65■■□□□ 1.06
LIN7CQ9NUP9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LIN7CQ9NUP9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
LIN7CQ9NUP9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.64■■□□□ 1.05
LIN7CQ9NUP9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.64■■□□□ 1.05
LIN7CQ9NUP9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LIN7CQ9NUP9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LIN7CQ9NUP9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.63■■□□□ 1.05
LIN7CQ9NUP9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LIN7CQ9NUP9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LIN7CQ9NUP9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LIN7CQ9NUP9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LIN7CQ9NUP9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.63■■□□□ 1.05
LIN7CQ9NUP9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
LIN7CQ9NUP9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.62■■□□□ 1.05
LIN7CQ9NUP9 AC142086.6-201ENST00000621154 1765 ntBASIC21.61■■□□□ 1.05
LIN7CQ9NUP9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
LIN7CQ9NUP9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
LIN7CQ9NUP9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LIN7CQ9NUP9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.6■■□□□ 1.05
LIN7CQ9NUP9 WASH5P-204ENST00000632292 975 ntBASIC21.6■■□□□ 1.05
LIN7CQ9NUP9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LIN7CQ9NUP9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LIN7CQ9NUP9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LIN7CQ9NUP9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.6■■□□□ 1.05
LIN7CQ9NUP9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LIN7CQ9NUP9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LIN7CQ9NUP9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LIN7CQ9NUP9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LIN7CQ9NUP9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LIN7CQ9NUP9 AL391121.1-201ENST00000607967 1349 ntBASIC21.58■■□□□ 1.05
LIN7CQ9NUP9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LIN7CQ9NUP9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
LIN7CQ9NUP9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LIN7CQ9NUP9 CAHM-201ENST00000604200 896 ntBASIC21.57■■□□□ 1.04
LIN7CQ9NUP9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LIN7CQ9NUP9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.57■■□□□ 1.04
LIN7CQ9NUP9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LIN7CQ9NUP9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.56■■□□□ 1.04
LIN7CQ9NUP9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LIN7CQ9NUP9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LIN7CQ9NUP9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.55■■□□□ 1.04
LIN7CQ9NUP9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LIN7CQ9NUP9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LIN7CQ9NUP9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LIN7CQ9NUP9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LIN7CQ9NUP9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.54■■□□□ 1.04
LIN7CQ9NUP9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LIN7CQ9NUP9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LIN7CQ9NUP9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LIN7CQ9NUP9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.53■■□□□ 1.04
LIN7CQ9NUP9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LIN7CQ9NUP9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LIN7CQ9NUP9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.52■■□□□ 1.04
LIN7CQ9NUP9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LIN7CQ9NUP9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LIN7CQ9NUP9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.51■■□□□ 1.03
LIN7CQ9NUP9 AL139393.2-201ENST00000608721 2025 ntBASIC21.51■■□□□ 1.03
LIN7CQ9NUP9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
LIN7CQ9NUP9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.5■■□□□ 1.03
LIN7CQ9NUP9 SUZ12P1-203ENST00000578195 985 ntBASIC21.5■■□□□ 1.03
LIN7CQ9NUP9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.49■■□□□ 1.03
LIN7CQ9NUP9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LIN7CQ9NUP9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LIN7CQ9NUP9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LIN7CQ9NUP9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LIN7CQ9NUP9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LIN7CQ9NUP9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LIN7CQ9NUP9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LIN7CQ9NUP9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LIN7CQ9NUP9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LIN7CQ9NUP9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LIN7CQ9NUP9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LIN7CQ9NUP9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LIN7CQ9NUP9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
LIN7CQ9NUP9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LIN7CQ9NUP9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LIN7CQ9NUP9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
LIN7CQ9NUP9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LIN7CQ9NUP9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.43■■□□□ 1.02
LIN7CQ9NUP9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LIN7CQ9NUP9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LIN7CQ9NUP9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
LIN7CQ9NUP9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LIN7CQ9NUP9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LIN7CQ9NUP9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
LIN7CQ9NUP9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.41■■□□□ 1.02
LIN7CQ9NUP9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LIN7CQ9NUP9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LIN7CQ9NUP9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
LIN7CQ9NUP9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LIN7CQ9NUP9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
LIN7CQ9NUP9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.4■■□□□ 1.02
LIN7CQ9NUP9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
LIN7CQ9NUP9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
LIN7CQ9NUP9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LIN7CQ9NUP9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms