Protein–RNA interactions for Protein: Q9NQ03

SCRT2, Transcriptional repressor scratch 2, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT2Q9NQ03 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.4■□□□□ 0.7
SCRT2Q9NQ03 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SCRT2Q9NQ03 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCRT2Q9NQ03 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.39■□□□□ 0.69
SCRT2Q9NQ03 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.39■□□□□ 0.69
SCRT2Q9NQ03 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.39■□□□□ 0.69
SCRT2Q9NQ03 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCRT2Q9NQ03 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SCRT2Q9NQ03 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCRT2Q9NQ03 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCRT2Q9NQ03 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCRT2Q9NQ03 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCRT2Q9NQ03 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCRT2Q9NQ03 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCRT2Q9NQ03 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCRT2Q9NQ03 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SCRT2Q9NQ03 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
SCRT2Q9NQ03 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.35■□□□□ 0.69
SCRT2Q9NQ03 AC142086.6-201ENST00000621154 1765 ntBASIC19.34■□□□□ 0.69
SCRT2Q9NQ03 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCRT2Q9NQ03 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCRT2Q9NQ03 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCRT2Q9NQ03 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SCRT2Q9NQ03 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCRT2Q9NQ03 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.33■□□□□ 0.69
SCRT2Q9NQ03 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.33■□□□□ 0.68
SCRT2Q9NQ03 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCRT2Q9NQ03 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCRT2Q9NQ03 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCRT2Q9NQ03 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SCRT2Q9NQ03 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCRT2Q9NQ03 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.32■□□□□ 0.68
SCRT2Q9NQ03 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCRT2Q9NQ03 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.32■□□□□ 0.68
SCRT2Q9NQ03 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCRT2Q9NQ03 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCRT2Q9NQ03 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCRT2Q9NQ03 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.3■□□□□ 0.68
SCRT2Q9NQ03 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCRT2Q9NQ03 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SCRT2Q9NQ03 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCRT2Q9NQ03 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SCRT2Q9NQ03 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.28■□□□□ 0.68
SCRT2Q9NQ03 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCRT2Q9NQ03 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCRT2Q9NQ03 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SCRT2Q9NQ03 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCRT2Q9NQ03 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.26■□□□□ 0.67
SCRT2Q9NQ03 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCRT2Q9NQ03 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCRT2Q9NQ03 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCRT2Q9NQ03 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCRT2Q9NQ03 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SCRT2Q9NQ03 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCRT2Q9NQ03 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCRT2Q9NQ03 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SCRT2Q9NQ03 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCRT2Q9NQ03 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.23■□□□□ 0.67
SCRT2Q9NQ03 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SCRT2Q9NQ03 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCRT2Q9NQ03 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCRT2Q9NQ03 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCRT2Q9NQ03 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCRT2Q9NQ03 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCRT2Q9NQ03 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCRT2Q9NQ03 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCRT2Q9NQ03 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.21■□□□□ 0.67
SCRT2Q9NQ03 WASH5P-204ENST00000632292 975 ntBASIC19.21■□□□□ 0.67
SCRT2Q9NQ03 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCRT2Q9NQ03 AL139393.2-201ENST00000608721 2025 ntBASIC19.2■□□□□ 0.66
SCRT2Q9NQ03 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.2■□□□□ 0.66
SCRT2Q9NQ03 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCRT2Q9NQ03 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SCRT2Q9NQ03 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.2■□□□□ 0.66
SCRT2Q9NQ03 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SCRT2Q9NQ03 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCRT2Q9NQ03 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SCRT2Q9NQ03 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCRT2Q9NQ03 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.19■□□□□ 0.66
SCRT2Q9NQ03 AL121749.1-202ENST00000609313 2153 ntBASIC19.19■□□□□ 0.66
SCRT2Q9NQ03 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCRT2Q9NQ03 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCRT2Q9NQ03 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCRT2Q9NQ03 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCRT2Q9NQ03 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCRT2Q9NQ03 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.16■□□□□ 0.66
SCRT2Q9NQ03 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.16■□□□□ 0.66
SCRT2Q9NQ03 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCRT2Q9NQ03 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCRT2Q9NQ03 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCRT2Q9NQ03 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCRT2Q9NQ03 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCRT2Q9NQ03 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCRT2Q9NQ03 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.14■□□□□ 0.65
SCRT2Q9NQ03 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCRT2Q9NQ03 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCRT2Q9NQ03 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCRT2Q9NQ03 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCRT2Q9NQ03 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCRT2Q9NQ03 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms