Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.62■■■□□ 2.49
VAT1LQ9HCJ6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
VAT1LQ9HCJ6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
VAT1LQ9HCJ6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
VAT1LQ9HCJ6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.57■■■□□ 2.49
VAT1LQ9HCJ6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
VAT1LQ9HCJ6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.57■■■□□ 2.48
VAT1LQ9HCJ6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.57■■■□□ 2.48
VAT1LQ9HCJ6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.57■■■□□ 2.48
VAT1LQ9HCJ6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
VAT1LQ9HCJ6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.56■■■□□ 2.48
VAT1LQ9HCJ6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.56■■■□□ 2.48
VAT1LQ9HCJ6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.55■■■□□ 2.48
VAT1LQ9HCJ6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
VAT1LQ9HCJ6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.55■■■□□ 2.48
VAT1LQ9HCJ6 AC010864.1-201ENST00000609407 1511 ntBASIC30.54■■■□□ 2.48
VAT1LQ9HCJ6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.54■■■□□ 2.48
VAT1LQ9HCJ6 DUX4L29-201ENST00000425409 679 ntBASIC30.54■■■□□ 2.48
VAT1LQ9HCJ6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
VAT1LQ9HCJ6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.53■■■□□ 2.48
VAT1LQ9HCJ6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
VAT1LQ9HCJ6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
VAT1LQ9HCJ6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.52■■■□□ 2.48
VAT1LQ9HCJ6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
VAT1LQ9HCJ6 AC021231.2-201ENST00000594613 730 ntBASIC30.52■■■□□ 2.48
VAT1LQ9HCJ6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.51■■■□□ 2.47
VAT1LQ9HCJ6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.51■■■□□ 2.47
VAT1LQ9HCJ6 AL135925.1-201ENST00000605920 1701 ntBASIC30.5■■■□□ 2.47
VAT1LQ9HCJ6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.5■■■□□ 2.47
VAT1LQ9HCJ6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
VAT1LQ9HCJ6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
VAT1LQ9HCJ6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.49■■■□□ 2.47
VAT1LQ9HCJ6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
VAT1LQ9HCJ6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
VAT1LQ9HCJ6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
VAT1LQ9HCJ6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
VAT1LQ9HCJ6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
VAT1LQ9HCJ6 ZNRF2P2-203ENST00000454624 420 ntBASIC30.45■■■□□ 2.47
VAT1LQ9HCJ6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
VAT1LQ9HCJ6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.45■■■□□ 2.46
VAT1LQ9HCJ6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
VAT1LQ9HCJ6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
VAT1LQ9HCJ6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.42■■■□□ 2.46
VAT1LQ9HCJ6 MIR7108-201ENST00000614319 87 ntBASIC30.42■■■□□ 2.46
VAT1LQ9HCJ6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
VAT1LQ9HCJ6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
VAT1LQ9HCJ6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
VAT1LQ9HCJ6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.4■■■□□ 2.46
VAT1LQ9HCJ6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
VAT1LQ9HCJ6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
VAT1LQ9HCJ6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
VAT1LQ9HCJ6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.37■■■□□ 2.45
VAT1LQ9HCJ6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
VAT1LQ9HCJ6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.37■■■□□ 2.45
VAT1LQ9HCJ6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
VAT1LQ9HCJ6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
VAT1LQ9HCJ6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
VAT1LQ9HCJ6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
VAT1LQ9HCJ6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
VAT1LQ9HCJ6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.35■■■□□ 2.45
VAT1LQ9HCJ6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.35■■■□□ 2.45
VAT1LQ9HCJ6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.35■■■□□ 2.45
VAT1LQ9HCJ6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.34■■■□□ 2.45
VAT1LQ9HCJ6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
VAT1LQ9HCJ6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
VAT1LQ9HCJ6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
VAT1LQ9HCJ6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.33■■■□□ 2.45
VAT1LQ9HCJ6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.32■■■□□ 2.44
VAT1LQ9HCJ6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.32■■■□□ 2.44
VAT1LQ9HCJ6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
VAT1LQ9HCJ6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
VAT1LQ9HCJ6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.3■■■□□ 2.44
VAT1LQ9HCJ6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
VAT1LQ9HCJ6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
VAT1LQ9HCJ6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
VAT1LQ9HCJ6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.29■■■□□ 2.44
VAT1LQ9HCJ6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
VAT1LQ9HCJ6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
VAT1LQ9HCJ6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
VAT1LQ9HCJ6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
VAT1LQ9HCJ6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
VAT1LQ9HCJ6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
VAT1LQ9HCJ6 ST7-AS1-201ENST00000456775 1889 ntBASIC30.27■■■□□ 2.44
VAT1LQ9HCJ6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
VAT1LQ9HCJ6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.26■■■□□ 2.43
VAT1LQ9HCJ6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
VAT1LQ9HCJ6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.25■■■□□ 2.43
VAT1LQ9HCJ6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
VAT1LQ9HCJ6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
VAT1LQ9HCJ6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
VAT1LQ9HCJ6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
VAT1LQ9HCJ6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
VAT1LQ9HCJ6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
VAT1LQ9HCJ6 AC127502.1-201ENST00000399971 1502 ntBASIC30.21■■■□□ 2.43
VAT1LQ9HCJ6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
VAT1LQ9HCJ6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.2■■■□□ 2.43
VAT1LQ9HCJ6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
VAT1LQ9HCJ6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
VAT1LQ9HCJ6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.19■■■□□ 2.42
VAT1LQ9HCJ6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms