Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 GPX1-201ENST00000419349 1106 ntBASIC22.25■■□□□ 1.15
GSX1Q9H4S2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GSX1Q9H4S2 DUX4L13-201ENST00000554103 1267 ntBASIC22.24■■□□□ 1.15
GSX1Q9H4S2 DUX4L15-201ENST00000611059 1267 ntBASIC22.24■■□□□ 1.15
GSX1Q9H4S2 DUX4L23-201ENST00000615195 1269 ntBASIC22.24■■□□□ 1.15
GSX1Q9H4S2 DUX4L24-201ENST00000617576 1269 ntBASIC22.24■■□□□ 1.15
GSX1Q9H4S2 DUX4L22-201ENST00000618238 1269 ntBASIC22.24■■□□□ 1.15
GSX1Q9H4S2 DUX4L20-201ENST00000619712 1269 ntBASIC22.24■■□□□ 1.15
GSX1Q9H4S2 DUX4L21-201ENST00000622058 1269 ntBASIC22.24■■□□□ 1.15
GSX1Q9H4S2 DUX4L10-201ENST00000622460 1267 ntBASIC22.24■■□□□ 1.15
GSX1Q9H4S2 DUX4L25-201ENST00000624915 1269 ntBASIC22.24■■□□□ 1.15
GSX1Q9H4S2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GSX1Q9H4S2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GSX1Q9H4S2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
GSX1Q9H4S2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GSX1Q9H4S2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.23■■□□□ 1.15
GSX1Q9H4S2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GSX1Q9H4S2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
GSX1Q9H4S2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.23■■□□□ 1.15
GSX1Q9H4S2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GSX1Q9H4S2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.23■■□□□ 1.15
GSX1Q9H4S2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GSX1Q9H4S2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GSX1Q9H4S2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
GSX1Q9H4S2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
GSX1Q9H4S2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
GSX1Q9H4S2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GSX1Q9H4S2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GSX1Q9H4S2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.22■■□□□ 1.15
GSX1Q9H4S2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GSX1Q9H4S2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC22.22■■□□□ 1.15
GSX1Q9H4S2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
GSX1Q9H4S2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GSX1Q9H4S2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
GSX1Q9H4S2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
GSX1Q9H4S2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
GSX1Q9H4S2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.19■■□□□ 1.14
GSX1Q9H4S2 AC012354.3-201ENST00000623734 483 ntBASIC22.19■■□□□ 1.14
GSX1Q9H4S2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
GSX1Q9H4S2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GSX1Q9H4S2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
GSX1Q9H4S2 RNF126P1-201ENST00000567452 1320 ntBASIC22.18■■□□□ 1.14
GSX1Q9H4S2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GSX1Q9H4S2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
GSX1Q9H4S2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
GSX1Q9H4S2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GSX1Q9H4S2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GSX1Q9H4S2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GSX1Q9H4S2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
GSX1Q9H4S2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GSX1Q9H4S2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
GSX1Q9H4S2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
GSX1Q9H4S2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
GSX1Q9H4S2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
GSX1Q9H4S2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
GSX1Q9H4S2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.15■■□□□ 1.14
GSX1Q9H4S2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
GSX1Q9H4S2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
GSX1Q9H4S2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.13■■□□□ 1.13
GSX1Q9H4S2 NTF6A-201ENST00000591175 560 ntBASIC22.13■■□□□ 1.13
GSX1Q9H4S2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
GSX1Q9H4S2 AL161658.1-201ENST00000623641 1967 ntBASIC22.12■■□□□ 1.13
GSX1Q9H4S2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
GSX1Q9H4S2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
GSX1Q9H4S2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
GSX1Q9H4S2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.11■■□□□ 1.13
GSX1Q9H4S2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
GSX1Q9H4S2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.11■■□□□ 1.13
GSX1Q9H4S2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
GSX1Q9H4S2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
GSX1Q9H4S2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
GSX1Q9H4S2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
GSX1Q9H4S2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.1■■□□□ 1.13
GSX1Q9H4S2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.1■■□□□ 1.13
GSX1Q9H4S2 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.1■■□□□ 1.13
GSX1Q9H4S2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
GSX1Q9H4S2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC22.09■■□□□ 1.13
GSX1Q9H4S2 AC018358.1-201ENST00000631079 1402 ntBASIC22.08■■□□□ 1.13
GSX1Q9H4S2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
GSX1Q9H4S2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
GSX1Q9H4S2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
GSX1Q9H4S2 AL033527.3-201ENST00000566366 1196 ntBASIC22.08■■□□□ 1.13
GSX1Q9H4S2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
GSX1Q9H4S2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
GSX1Q9H4S2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.08■■□□□ 1.12
GSX1Q9H4S2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
GSX1Q9H4S2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.08■■□□□ 1.12
GSX1Q9H4S2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
GSX1Q9H4S2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
GSX1Q9H4S2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
GSX1Q9H4S2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
GSX1Q9H4S2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.06■■□□□ 1.12
GSX1Q9H4S2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
GSX1Q9H4S2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
GSX1Q9H4S2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
GSX1Q9H4S2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
GSX1Q9H4S2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
GSX1Q9H4S2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
GSX1Q9H4S2 AC008813.1-201ENST00000536597 885 ntBASIC22.05■■□□□ 1.12
GSX1Q9H4S2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms