Protein–RNA interactions for Protein: Q9H4L7

SMARCAD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, humanhuman

Predictions only

Length 1,026 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1Q9H4L7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.51■■■□□ 2.31
SMARCAD1Q9H4L7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
SMARCAD1Q9H4L7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
SMARCAD1Q9H4L7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SMARCAD1Q9H4L7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SMARCAD1Q9H4L7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
SMARCAD1Q9H4L7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.48■■■□□ 2.31
SMARCAD1Q9H4L7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.47■■■□□ 2.31
SMARCAD1Q9H4L7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.47■■■□□ 2.31
SMARCAD1Q9H4L7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
SMARCAD1Q9H4L7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SMARCAD1Q9H4L7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
SMARCAD1Q9H4L7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SMARCAD1Q9H4L7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.43■■■□□ 2.3
SMARCAD1Q9H4L7 LINC01971-201ENST00000617888 1048 ntBASIC29.43■■■□□ 2.3
SMARCAD1Q9H4L7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SMARCAD1Q9H4L7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SMARCAD1Q9H4L7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.43■■■□□ 2.3
SMARCAD1Q9H4L7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SMARCAD1Q9H4L7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.42■■■□□ 2.3
SMARCAD1Q9H4L7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SMARCAD1Q9H4L7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.41■■■□□ 2.3
SMARCAD1Q9H4L7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.41■■■□□ 2.3
SMARCAD1Q9H4L7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.39■■■□□ 2.3
SMARCAD1Q9H4L7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.39■■■□□ 2.3
SMARCAD1Q9H4L7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SMARCAD1Q9H4L7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SMARCAD1Q9H4L7 DUX4L11-201ENST00000611504 1267 ntBASIC29.38■■■□□ 2.29
SMARCAD1Q9H4L7 DUX4L12-201ENST00000614593 1267 ntBASIC29.38■■■□□ 2.29
SMARCAD1Q9H4L7 DUX4L14-201ENST00000621227 1267 ntBASIC29.38■■■□□ 2.29
SMARCAD1Q9H4L7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.37■■■□□ 2.29
SMARCAD1Q9H4L7 AC010864.1-201ENST00000609407 1511 ntBASIC29.37■■■□□ 2.29
SMARCAD1Q9H4L7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SMARCAD1Q9H4L7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SMARCAD1Q9H4L7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
SMARCAD1Q9H4L7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SMARCAD1Q9H4L7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SMARCAD1Q9H4L7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.34■■■□□ 2.29
SMARCAD1Q9H4L7 MIR3648-2-201ENST00000581792 180 ntBASIC29.33■■■□□ 2.29
SMARCAD1Q9H4L7 MIR3648-1-201ENST00000615959 180 ntBASIC29.33■■■□□ 2.29
SMARCAD1Q9H4L7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.33■■■□□ 2.29
SMARCAD1Q9H4L7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.32■■■□□ 2.28
SMARCAD1Q9H4L7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.32■■■□□ 2.28
SMARCAD1Q9H4L7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.32■■■□□ 2.28
SMARCAD1Q9H4L7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.32■■■□□ 2.28
SMARCAD1Q9H4L7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.32■■■□□ 2.28
SMARCAD1Q9H4L7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.31■■■□□ 2.28
SMARCAD1Q9H4L7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SMARCAD1Q9H4L7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.3■■■□□ 2.28
SMARCAD1Q9H4L7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SMARCAD1Q9H4L7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.29■■■□□ 2.28
SMARCAD1Q9H4L7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SMARCAD1Q9H4L7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SMARCAD1Q9H4L7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SMARCAD1Q9H4L7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
SMARCAD1Q9H4L7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
SMARCAD1Q9H4L7 MIR639-201ENST00000384974 98 ntBASIC29.28■■■□□ 2.28
SMARCAD1Q9H4L7 AC016575.1-201ENST00000607026 382 ntBASIC29.28■■■□□ 2.28
SMARCAD1Q9H4L7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SMARCAD1Q9H4L7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.27■■■□□ 2.28
SMARCAD1Q9H4L7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.27■■■□□ 2.28
SMARCAD1Q9H4L7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.26■■■□□ 2.27
SMARCAD1Q9H4L7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SMARCAD1Q9H4L7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SMARCAD1Q9H4L7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
SMARCAD1Q9H4L7 CR559946.2-201ENST00000623684 991 ntBASIC29.25■■■□□ 2.27
SMARCAD1Q9H4L7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCAD1Q9H4L7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCAD1Q9H4L7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SMARCAD1Q9H4L7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SMARCAD1Q9H4L7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SMARCAD1Q9H4L7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SMARCAD1Q9H4L7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SMARCAD1Q9H4L7 MIR4449-201ENST00000578365 66 ntBASIC29.21■■■□□ 2.27
SMARCAD1Q9H4L7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
SMARCAD1Q9H4L7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SMARCAD1Q9H4L7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
SMARCAD1Q9H4L7 DUX4L13-201ENST00000554103 1267 ntBASIC29.19■■■□□ 2.26
SMARCAD1Q9H4L7 DUX4L15-201ENST00000611059 1267 ntBASIC29.19■■■□□ 2.26
SMARCAD1Q9H4L7 DUX4L23-201ENST00000615195 1269 ntBASIC29.19■■■□□ 2.26
SMARCAD1Q9H4L7 DUX4L24-201ENST00000617576 1269 ntBASIC29.19■■■□□ 2.26
SMARCAD1Q9H4L7 DUX4L22-201ENST00000618238 1269 ntBASIC29.19■■■□□ 2.26
SMARCAD1Q9H4L7 DUX4L20-201ENST00000619712 1269 ntBASIC29.19■■■□□ 2.26
SMARCAD1Q9H4L7 DUX4L21-201ENST00000622058 1269 ntBASIC29.19■■■□□ 2.26
SMARCAD1Q9H4L7 DUX4L10-201ENST00000622460 1267 ntBASIC29.19■■■□□ 2.26
SMARCAD1Q9H4L7 DUX4L25-201ENST00000624915 1269 ntBASIC29.19■■■□□ 2.26
SMARCAD1Q9H4L7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
SMARCAD1Q9H4L7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SMARCAD1Q9H4L7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
SMARCAD1Q9H4L7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.17■■■□□ 2.26
SMARCAD1Q9H4L7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SMARCAD1Q9H4L7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SMARCAD1Q9H4L7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.17■■■□□ 2.26
SMARCAD1Q9H4L7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
SMARCAD1Q9H4L7 LINC00273-201ENST00000539813 1452 ntBASIC29.16■■■□□ 2.26
SMARCAD1Q9H4L7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.16■■■□□ 2.26
SMARCAD1Q9H4L7 AL135925.1-201ENST00000605920 1701 ntBASIC29.15■■■□□ 2.26
SMARCAD1Q9H4L7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SMARCAD1Q9H4L7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.15■■■□□ 2.26
SMARCAD1Q9H4L7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms