Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
ATXN3LQ9H3M9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
ATXN3LQ9H3M9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
ATXN3LQ9H3M9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
ATXN3LQ9H3M9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.72■■■□□ 2.03
ATXN3LQ9H3M9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.72■■■□□ 2.03
ATXN3LQ9H3M9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.71■■■□□ 2.03
ATXN3LQ9H3M9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.7■■■□□ 2.03
ATXN3LQ9H3M9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ATXN3LQ9H3M9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.7■■■□□ 2.02
ATXN3LQ9H3M9 AL161658.1-201ENST00000623641 1967 ntBASIC27.69■■■□□ 2.02
ATXN3LQ9H3M9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
ATXN3LQ9H3M9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.69■■■□□ 2.02
ATXN3LQ9H3M9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
ATXN3LQ9H3M9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ATXN3LQ9H3M9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.68■■■□□ 2.02
ATXN3LQ9H3M9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ATXN3LQ9H3M9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.67■■■□□ 2.02
ATXN3LQ9H3M9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ATXN3LQ9H3M9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
ATXN3LQ9H3M9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ATXN3LQ9H3M9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
ATXN3LQ9H3M9 LINC01971-201ENST00000617888 1048 ntBASIC27.66■■■□□ 2.02
ATXN3LQ9H3M9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
ATXN3LQ9H3M9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
ATXN3LQ9H3M9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
ATXN3LQ9H3M9 DUX4L11-201ENST00000611504 1267 ntBASIC27.65■■■□□ 2.02
ATXN3LQ9H3M9 DUX4L12-201ENST00000614593 1267 ntBASIC27.65■■■□□ 2.02
ATXN3LQ9H3M9 DUX4L14-201ENST00000621227 1267 ntBASIC27.65■■■□□ 2.02
ATXN3LQ9H3M9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
ATXN3LQ9H3M9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
ATXN3LQ9H3M9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
ATXN3LQ9H3M9 MIR3648-2-201ENST00000581792 180 ntBASIC27.63■■■□□ 2.01
ATXN3LQ9H3M9 MIR3648-1-201ENST00000615959 180 ntBASIC27.63■■■□□ 2.01
ATXN3LQ9H3M9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.63■■■□□ 2.01
ATXN3LQ9H3M9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
ATXN3LQ9H3M9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
ATXN3LQ9H3M9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
ATXN3LQ9H3M9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.62■■■□□ 2.01
ATXN3LQ9H3M9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.62■■■□□ 2.01
ATXN3LQ9H3M9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.62■■■□□ 2.01
ATXN3LQ9H3M9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
ATXN3LQ9H3M9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.62■■■□□ 2.01
ATXN3LQ9H3M9 MIR639-201ENST00000384974 98 ntBASIC27.61■■■□□ 2.01
ATXN3LQ9H3M9 AC016575.1-201ENST00000607026 382 ntBASIC27.61■■■□□ 2.01
ATXN3LQ9H3M9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ATXN3LQ9H3M9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
ATXN3LQ9H3M9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
ATXN3LQ9H3M9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
ATXN3LQ9H3M9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.59■■■□□ 2.01
ATXN3LQ9H3M9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
ATXN3LQ9H3M9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
ATXN3LQ9H3M9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
ATXN3LQ9H3M9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.58■■■□□ 2.01
ATXN3LQ9H3M9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.58■■■□□ 2.01
ATXN3LQ9H3M9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.58■■■□□ 2.01
ATXN3LQ9H3M9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.58■■■□□ 2.01
ATXN3LQ9H3M9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
ATXN3LQ9H3M9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.57■■■□□ 2
ATXN3LQ9H3M9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.57■■■□□ 2
ATXN3LQ9H3M9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.56■■■□□ 2
ATXN3LQ9H3M9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.56■■■□□ 2
ATXN3LQ9H3M9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ATXN3LQ9H3M9 MIR4449-201ENST00000578365 66 ntBASIC27.56■■■□□ 2
ATXN3LQ9H3M9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.55■■■□□ 2
ATXN3LQ9H3M9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.55■■■□□ 2
ATXN3LQ9H3M9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.55■■■□□ 2
ATXN3LQ9H3M9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.55■■■□□ 2
ATXN3LQ9H3M9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
ATXN3LQ9H3M9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
ATXN3LQ9H3M9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.54■■■□□ 2
ATXN3LQ9H3M9 CR559946.2-201ENST00000623684 991 ntBASIC27.54■■■□□ 2
ATXN3LQ9H3M9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
ATXN3LQ9H3M9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
ATXN3LQ9H3M9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ATXN3LQ9H3M9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ATXN3LQ9H3M9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.47■■□□□ 1.99
ATXN3LQ9H3M9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
ATXN3LQ9H3M9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.46■■□□□ 1.99
ATXN3LQ9H3M9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.46■■□□□ 1.99
ATXN3LQ9H3M9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
ATXN3LQ9H3M9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.98
ATXN3LQ9H3M9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.44■■□□□ 1.98
ATXN3LQ9H3M9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ATXN3LQ9H3M9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ATXN3LQ9H3M9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ATXN3LQ9H3M9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.44■■□□□ 1.98
ATXN3LQ9H3M9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ATXN3LQ9H3M9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
ATXN3LQ9H3M9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ATXN3LQ9H3M9 AC010864.1-201ENST00000609407 1511 ntBASIC27.42■■□□□ 1.98
ATXN3LQ9H3M9 DUX4L13-201ENST00000554103 1267 ntBASIC27.42■■□□□ 1.98
ATXN3LQ9H3M9 DUX4L15-201ENST00000611059 1267 ntBASIC27.42■■□□□ 1.98
ATXN3LQ9H3M9 DUX4L23-201ENST00000615195 1269 ntBASIC27.42■■□□□ 1.98
ATXN3LQ9H3M9 DUX4L24-201ENST00000617576 1269 ntBASIC27.42■■□□□ 1.98
ATXN3LQ9H3M9 DUX4L22-201ENST00000618238 1269 ntBASIC27.42■■□□□ 1.98
ATXN3LQ9H3M9 DUX4L20-201ENST00000619712 1269 ntBASIC27.42■■□□□ 1.98
ATXN3LQ9H3M9 DUX4L21-201ENST00000622058 1269 ntBASIC27.42■■□□□ 1.98
ATXN3LQ9H3M9 DUX4L10-201ENST00000622460 1267 ntBASIC27.42■■□□□ 1.98
ATXN3LQ9H3M9 DUX4L25-201ENST00000624915 1269 ntBASIC27.42■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms