Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.55■■■□□ 2.8
VPS33BQ9H267 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
VPS33BQ9H267 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
VPS33BQ9H267 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.54■■■□□ 2.8
VPS33BQ9H267 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.54■■■□□ 2.8
VPS33BQ9H267 HES6-205ENST00000409356 528 ntTSL 2 BASIC32.54■■■□□ 2.8
VPS33BQ9H267 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC32.54■■■□□ 2.8
VPS33BQ9H267 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC32.54■■■□□ 2.8
VPS33BQ9H267 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.52■■■□□ 2.8
VPS33BQ9H267 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.51■■■□□ 2.8
VPS33BQ9H267 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.49■■■□□ 2.79
VPS33BQ9H267 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.49■■■□□ 2.79
VPS33BQ9H267 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
VPS33BQ9H267 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.48■■■□□ 2.79
VPS33BQ9H267 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
VPS33BQ9H267 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.46■■■□□ 2.79
VPS33BQ9H267 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.46■■■□□ 2.79
VPS33BQ9H267 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
VPS33BQ9H267 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC32.45■■■□□ 2.79
VPS33BQ9H267 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
VPS33BQ9H267 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
VPS33BQ9H267 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.43■■■□□ 2.78
VPS33BQ9H267 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
VPS33BQ9H267 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.42■■■□□ 2.78
VPS33BQ9H267 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
VPS33BQ9H267 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
VPS33BQ9H267 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
VPS33BQ9H267 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
VPS33BQ9H267 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
VPS33BQ9H267 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
VPS33BQ9H267 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
VPS33BQ9H267 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
VPS33BQ9H267 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
VPS33BQ9H267 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
VPS33BQ9H267 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.38■■■□□ 2.77
VPS33BQ9H267 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
VPS33BQ9H267 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
VPS33BQ9H267 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
VPS33BQ9H267 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
VPS33BQ9H267 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
VPS33BQ9H267 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.34■■■□□ 2.77
VPS33BQ9H267 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC32.33■■■□□ 2.77
VPS33BQ9H267 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.33■■■□□ 2.77
VPS33BQ9H267 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.33■■■□□ 2.77
VPS33BQ9H267 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
VPS33BQ9H267 RARRES2P2-201ENST00000394842 485 ntBASIC32.32■■■□□ 2.76
VPS33BQ9H267 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC32.32■■■□□ 2.76
VPS33BQ9H267 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
VPS33BQ9H267 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
VPS33BQ9H267 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.31■■■□□ 2.76
VPS33BQ9H267 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
VPS33BQ9H267 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
VPS33BQ9H267 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
VPS33BQ9H267 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
VPS33BQ9H267 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
VPS33BQ9H267 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.26■■■□□ 2.75
VPS33BQ9H267 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.25■■■□□ 2.75
VPS33BQ9H267 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.25■■■□□ 2.75
VPS33BQ9H267 ABHD17AP5-201ENST00000580133 923 ntBASIC32.25■■■□□ 2.75
VPS33BQ9H267 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.23■■■□□ 2.75
VPS33BQ9H267 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
VPS33BQ9H267 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
VPS33BQ9H267 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
VPS33BQ9H267 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC32.21■■■□□ 2.75
VPS33BQ9H267 RNF126P1-201ENST00000567452 1320 ntBASIC32.21■■■□□ 2.75
VPS33BQ9H267 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
VPS33BQ9H267 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.2■■■□□ 2.75
VPS33BQ9H267 AC120057.4-201ENST00000624722 1615 ntBASIC32.2■■■□□ 2.75
VPS33BQ9H267 GPX1-201ENST00000419349 1106 ntBASIC32.2■■■□□ 2.75
VPS33BQ9H267 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
VPS33BQ9H267 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
VPS33BQ9H267 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
VPS33BQ9H267 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.19■■■□□ 2.74
VPS33BQ9H267 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
VPS33BQ9H267 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.18■■■□□ 2.74
VPS33BQ9H267 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.17■■■□□ 2.74
VPS33BQ9H267 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
VPS33BQ9H267 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.17■■■□□ 2.74
VPS33BQ9H267 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
VPS33BQ9H267 LINC00273-201ENST00000539813 1452 ntBASIC32.16■■■□□ 2.74
VPS33BQ9H267 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
VPS33BQ9H267 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.16■■■□□ 2.74
VPS33BQ9H267 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
VPS33BQ9H267 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
VPS33BQ9H267 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.16■■■□□ 2.74
VPS33BQ9H267 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
VPS33BQ9H267 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
VPS33BQ9H267 TPT1-202ENST00000379055 948 ntTSL 2 BASIC32.14■■■□□ 2.74
VPS33BQ9H267 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC32.14■■■□□ 2.74
VPS33BQ9H267 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
VPS33BQ9H267 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
VPS33BQ9H267 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
VPS33BQ9H267 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
VPS33BQ9H267 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
VPS33BQ9H267 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
VPS33BQ9H267 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
VPS33BQ9H267 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
VPS33BQ9H267 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
VPS33BQ9H267 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
VPS33BQ9H267 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms