Protein–RNA interactions for Protein: Q9GZV3

SLC5A7, High affinity choline transporter 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A7Q9GZV3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC5A7Q9GZV3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC5A7Q9GZV3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC5A7Q9GZV3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
SLC5A7Q9GZV3 AP002365.1-201ENST00000603448 772 ntBASIC21.93■■□□□ 1.1
SLC5A7Q9GZV3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC5A7Q9GZV3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SLC5A7Q9GZV3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC5A7Q9GZV3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC5A7Q9GZV3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC5A7Q9GZV3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC5A7Q9GZV3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SLC5A7Q9GZV3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SLC5A7Q9GZV3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC5A7Q9GZV3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC5A7Q9GZV3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC5A7Q9GZV3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC5A7Q9GZV3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC5A7Q9GZV3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC5A7Q9GZV3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC5A7Q9GZV3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC5A7Q9GZV3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SLC5A7Q9GZV3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SLC5A7Q9GZV3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.89■■□□□ 1.09
SLC5A7Q9GZV3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SLC5A7Q9GZV3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC5A7Q9GZV3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC5A7Q9GZV3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC5A7Q9GZV3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SLC5A7Q9GZV3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SLC5A7Q9GZV3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SLC5A7Q9GZV3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC5A7Q9GZV3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC5A7Q9GZV3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC5A7Q9GZV3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC5A7Q9GZV3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SLC5A7Q9GZV3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC5A7Q9GZV3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC5A7Q9GZV3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC5A7Q9GZV3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC5A7Q9GZV3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC5A7Q9GZV3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC5A7Q9GZV3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC5A7Q9GZV3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC5A7Q9GZV3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC5A7Q9GZV3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC5A7Q9GZV3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC5A7Q9GZV3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC5A7Q9GZV3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC5A7Q9GZV3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC5A7Q9GZV3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC5A7Q9GZV3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC5A7Q9GZV3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC5A7Q9GZV3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC5A7Q9GZV3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC5A7Q9GZV3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC5A7Q9GZV3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC5A7Q9GZV3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC5A7Q9GZV3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC5A7Q9GZV3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC5A7Q9GZV3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC5A7Q9GZV3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC5A7Q9GZV3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
SLC5A7Q9GZV3 WASH5P-204ENST00000632292 975 ntBASIC21.77■■□□□ 1.08
SLC5A7Q9GZV3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC5A7Q9GZV3 AC135731.1-201ENST00000569415 2548 ntBASIC21.77■■□□□ 1.08
SLC5A7Q9GZV3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC5A7Q9GZV3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.76■■□□□ 1.07
SLC5A7Q9GZV3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.76■■□□□ 1.07
SLC5A7Q9GZV3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC5A7Q9GZV3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC5A7Q9GZV3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC5A7Q9GZV3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC5A7Q9GZV3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC5A7Q9GZV3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC5A7Q9GZV3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC5A7Q9GZV3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SLC5A7Q9GZV3 AL139393.2-201ENST00000608721 2025 ntBASIC21.73■■□□□ 1.07
SLC5A7Q9GZV3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC5A7Q9GZV3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.73■■□□□ 1.07
SLC5A7Q9GZV3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC5A7Q9GZV3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC5A7Q9GZV3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC5A7Q9GZV3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC5A7Q9GZV3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC5A7Q9GZV3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC5A7Q9GZV3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC5A7Q9GZV3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC5A7Q9GZV3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC5A7Q9GZV3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC5A7Q9GZV3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC5A7Q9GZV3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC5A7Q9GZV3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC5A7Q9GZV3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC5A7Q9GZV3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC5A7Q9GZV3 AL121749.1-202ENST00000609313 2153 ntBASIC21.69■■□□□ 1.06
SLC5A7Q9GZV3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC5A7Q9GZV3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC5A7Q9GZV3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SLC5A7Q9GZV3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms