Protein–RNA interactions for Protein: Q9C0H5

ARHGAP39, Rho GTPase-activating protein 39, humanhuman

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39Q9C0H5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.61■■■□□ 2.49
ARHGAP39Q9C0H5 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ARHGAP39Q9C0H5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.61■■■□□ 2.49
ARHGAP39Q9C0H5 ABHD17AP5-201ENST00000580133 923 ntBASIC30.61■■■□□ 2.49
ARHGAP39Q9C0H5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
ARHGAP39Q9C0H5 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.6■■■□□ 2.49
ARHGAP39Q9C0H5 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.59■■■□□ 2.49
ARHGAP39Q9C0H5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.59■■■□□ 2.49
ARHGAP39Q9C0H5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGAP39Q9C0H5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGAP39Q9C0H5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGAP39Q9C0H5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGAP39Q9C0H5 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.58■■■□□ 2.49
ARHGAP39Q9C0H5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGAP39Q9C0H5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGAP39Q9C0H5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGAP39Q9C0H5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGAP39Q9C0H5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGAP39Q9C0H5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGAP39Q9C0H5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGAP39Q9C0H5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
ARHGAP39Q9C0H5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
ARHGAP39Q9C0H5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARHGAP39Q9C0H5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARHGAP39Q9C0H5 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARHGAP39Q9C0H5 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARHGAP39Q9C0H5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARHGAP39Q9C0H5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARHGAP39Q9C0H5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
ARHGAP39Q9C0H5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ARHGAP39Q9C0H5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ARHGAP39Q9C0H5 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
ARHGAP39Q9C0H5 GPX1-201ENST00000419349 1106 ntBASIC30.52■■■□□ 2.48
ARHGAP39Q9C0H5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGAP39Q9C0H5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.52■■■□□ 2.48
ARHGAP39Q9C0H5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.51■■■□□ 2.47
ARHGAP39Q9C0H5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
ARHGAP39Q9C0H5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
ARHGAP39Q9C0H5 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
ARHGAP39Q9C0H5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
ARHGAP39Q9C0H5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
ARHGAP39Q9C0H5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.45■■■□□ 2.46
ARHGAP39Q9C0H5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
ARHGAP39Q9C0H5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
ARHGAP39Q9C0H5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.44■■■□□ 2.46
ARHGAP39Q9C0H5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
ARHGAP39Q9C0H5 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.43■■■□□ 2.46
ARHGAP39Q9C0H5 RNF126P1-201ENST00000567452 1320 ntBASIC30.43■■■□□ 2.46
ARHGAP39Q9C0H5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.42■■■□□ 2.46
ARHGAP39Q9C0H5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
ARHGAP39Q9C0H5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.42■■■□□ 2.46
ARHGAP39Q9C0H5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ARHGAP39Q9C0H5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.41■■■□□ 2.46
ARHGAP39Q9C0H5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
ARHGAP39Q9C0H5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
ARHGAP39Q9C0H5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
ARHGAP39Q9C0H5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.39■■■□□ 2.46
ARHGAP39Q9C0H5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.39■■■□□ 2.46
ARHGAP39Q9C0H5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
ARHGAP39Q9C0H5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.38■■■□□ 2.45
ARHGAP39Q9C0H5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
ARHGAP39Q9C0H5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.37■■■□□ 2.45
ARHGAP39Q9C0H5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
ARHGAP39Q9C0H5 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
ARHGAP39Q9C0H5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.36■■■□□ 2.45
ARHGAP39Q9C0H5 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.36■■■□□ 2.45
ARHGAP39Q9C0H5 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
ARHGAP39Q9C0H5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.35■■■□□ 2.45
ARHGAP39Q9C0H5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.34■■■□□ 2.45
ARHGAP39Q9C0H5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
ARHGAP39Q9C0H5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
ARHGAP39Q9C0H5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.33■■■□□ 2.45
ARHGAP39Q9C0H5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ARHGAP39Q9C0H5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
ARHGAP39Q9C0H5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
ARHGAP39Q9C0H5 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
ARHGAP39Q9C0H5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ARHGAP39Q9C0H5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.28■■■□□ 2.44
ARHGAP39Q9C0H5 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
ARHGAP39Q9C0H5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.27■■■□□ 2.44
ARHGAP39Q9C0H5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
ARHGAP39Q9C0H5 NTF6A-201ENST00000591175 560 ntBASIC30.26■■■□□ 2.43
ARHGAP39Q9C0H5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.25■■■□□ 2.43
ARHGAP39Q9C0H5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.24■■■□□ 2.43
ARHGAP39Q9C0H5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
ARHGAP39Q9C0H5 AC012354.3-201ENST00000623734 483 ntBASIC30.23■■■□□ 2.43
ARHGAP39Q9C0H5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.22■■■□□ 2.43
ARHGAP39Q9C0H5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
ARHGAP39Q9C0H5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ARHGAP39Q9C0H5 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.21■■■□□ 2.43
ARHGAP39Q9C0H5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
ARHGAP39Q9C0H5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
ARHGAP39Q9C0H5 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
ARHGAP39Q9C0H5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
ARHGAP39Q9C0H5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
ARHGAP39Q9C0H5 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ARHGAP39Q9C0H5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ARHGAP39Q9C0H5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
ARHGAP39Q9C0H5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.17■■■□□ 2.42
ARHGAP39Q9C0H5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms