Protein–RNA interactions for Protein: Q9BRS2

RIOK1, Serine/threonine-protein kinase RIO1, humanhuman

Known RBP Predictions only

Length 568 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK1Q9BRS2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RIOK1Q9BRS2 DUX4L29-201ENST00000425409 679 ntBASIC31.68■■■□□ 2.66
RIOK1Q9BRS2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RIOK1Q9BRS2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.66■■■□□ 2.66
RIOK1Q9BRS2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
RIOK1Q9BRS2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.65■■■□□ 2.66
RIOK1Q9BRS2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
RIOK1Q9BRS2 ZNRF2P2-203ENST00000454624 420 ntBASIC31.65■■■□□ 2.66
RIOK1Q9BRS2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
RIOK1Q9BRS2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
RIOK1Q9BRS2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.64■■■□□ 2.66
RIOK1Q9BRS2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.63■■■□□ 2.65
RIOK1Q9BRS2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RIOK1Q9BRS2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.63■■■□□ 2.65
RIOK1Q9BRS2 MIR7108-201ENST00000614319 87 ntBASIC31.63■■■□□ 2.65
RIOK1Q9BRS2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.63■■■□□ 2.65
RIOK1Q9BRS2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
RIOK1Q9BRS2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
RIOK1Q9BRS2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
RIOK1Q9BRS2 AC010864.1-201ENST00000609407 1511 ntBASIC31.61■■■□□ 2.65
RIOK1Q9BRS2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
RIOK1Q9BRS2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
RIOK1Q9BRS2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
RIOK1Q9BRS2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RIOK1Q9BRS2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.59■■■□□ 2.65
RIOK1Q9BRS2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RIOK1Q9BRS2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RIOK1Q9BRS2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
RIOK1Q9BRS2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.53■■■□□ 2.64
RIOK1Q9BRS2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.53■■■□□ 2.64
RIOK1Q9BRS2 AL135925.1-201ENST00000605920 1701 ntBASIC31.52■■■□□ 2.64
RIOK1Q9BRS2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RIOK1Q9BRS2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.51■■■□□ 2.63
RIOK1Q9BRS2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.51■■■□□ 2.63
RIOK1Q9BRS2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RIOK1Q9BRS2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
RIOK1Q9BRS2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.49■■■□□ 2.63
RIOK1Q9BRS2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
RIOK1Q9BRS2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RIOK1Q9BRS2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
RIOK1Q9BRS2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.48■■■□□ 2.63
RIOK1Q9BRS2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
RIOK1Q9BRS2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RIOK1Q9BRS2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.46■■■□□ 2.63
RIOK1Q9BRS2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RIOK1Q9BRS2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
RIOK1Q9BRS2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
RIOK1Q9BRS2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
RIOK1Q9BRS2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.44■■■□□ 2.62
RIOK1Q9BRS2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.44■■■□□ 2.62
RIOK1Q9BRS2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.44■■■□□ 2.62
RIOK1Q9BRS2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
RIOK1Q9BRS2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
RIOK1Q9BRS2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RIOK1Q9BRS2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RIOK1Q9BRS2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.42■■■□□ 2.62
RIOK1Q9BRS2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RIOK1Q9BRS2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.42■■■□□ 2.62
RIOK1Q9BRS2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
RIOK1Q9BRS2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RIOK1Q9BRS2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RIOK1Q9BRS2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
RIOK1Q9BRS2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
RIOK1Q9BRS2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
RIOK1Q9BRS2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RIOK1Q9BRS2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RIOK1Q9BRS2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RIOK1Q9BRS2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.37■■■□□ 2.61
RIOK1Q9BRS2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.37■■■□□ 2.61
RIOK1Q9BRS2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RIOK1Q9BRS2 LINC01971-201ENST00000617888 1048 ntBASIC31.33■■■□□ 2.61
RIOK1Q9BRS2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.61
RIOK1Q9BRS2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.61
RIOK1Q9BRS2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RIOK1Q9BRS2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.31■■■□□ 2.6
RIOK1Q9BRS2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
RIOK1Q9BRS2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RIOK1Q9BRS2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
RIOK1Q9BRS2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.3■■■□□ 2.6
RIOK1Q9BRS2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
RIOK1Q9BRS2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.3■■■□□ 2.6
RIOK1Q9BRS2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
RIOK1Q9BRS2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RIOK1Q9BRS2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
RIOK1Q9BRS2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RIOK1Q9BRS2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.28■■■□□ 2.6
RIOK1Q9BRS2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
RIOK1Q9BRS2 DUX4L11-201ENST00000611504 1267 ntBASIC31.27■■■□□ 2.6
RIOK1Q9BRS2 DUX4L12-201ENST00000614593 1267 ntBASIC31.27■■■□□ 2.6
RIOK1Q9BRS2 DUX4L14-201ENST00000621227 1267 ntBASIC31.27■■■□□ 2.6
RIOK1Q9BRS2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.27■■■□□ 2.6
RIOK1Q9BRS2 AC127502.1-201ENST00000399971 1502 ntBASIC31.27■■■□□ 2.6
RIOK1Q9BRS2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
RIOK1Q9BRS2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
RIOK1Q9BRS2 ST7-AS1-201ENST00000456775 1889 ntBASIC31.25■■■□□ 2.59
RIOK1Q9BRS2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.24■■■□□ 2.59
RIOK1Q9BRS2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.24■■■□□ 2.59
RIOK1Q9BRS2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.24■■■□□ 2.59
RIOK1Q9BRS2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.24■■■□□ 2.59
RIOK1Q9BRS2 LINC00273-201ENST00000539813 1452 ntBASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms