Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
CASD1Q96PB1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
CASD1Q96PB1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CASD1Q96PB1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CASD1Q96PB1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CASD1Q96PB1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
CASD1Q96PB1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CASD1Q96PB1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.58■■■□□ 2.17
CASD1Q96PB1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CASD1Q96PB1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CASD1Q96PB1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CASD1Q96PB1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
CASD1Q96PB1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CASD1Q96PB1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
CASD1Q96PB1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CASD1Q96PB1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.56■■■□□ 2.16
CASD1Q96PB1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CASD1Q96PB1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.55■■■□□ 2.16
CASD1Q96PB1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CASD1Q96PB1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.55■■■□□ 2.16
CASD1Q96PB1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
CASD1Q96PB1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
CASD1Q96PB1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
CASD1Q96PB1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.54■■■□□ 2.16
CASD1Q96PB1 AL161658.1-201ENST00000623641 1967 ntBASIC28.53■■■□□ 2.16
CASD1Q96PB1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.53■■■□□ 2.16
CASD1Q96PB1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CASD1Q96PB1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CASD1Q96PB1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.53■■■□□ 2.16
CASD1Q96PB1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CASD1Q96PB1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CASD1Q96PB1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CASD1Q96PB1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CASD1Q96PB1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.51■■■□□ 2.15
CASD1Q96PB1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CASD1Q96PB1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CASD1Q96PB1 DUX4L13-201ENST00000554103 1267 ntBASIC28.49■■■□□ 2.15
CASD1Q96PB1 DUX4L15-201ENST00000611059 1267 ntBASIC28.49■■■□□ 2.15
CASD1Q96PB1 DUX4L23-201ENST00000615195 1269 ntBASIC28.49■■■□□ 2.15
CASD1Q96PB1 DUX4L24-201ENST00000617576 1269 ntBASIC28.49■■■□□ 2.15
CASD1Q96PB1 DUX4L22-201ENST00000618238 1269 ntBASIC28.49■■■□□ 2.15
CASD1Q96PB1 DUX4L20-201ENST00000619712 1269 ntBASIC28.49■■■□□ 2.15
CASD1Q96PB1 DUX4L21-201ENST00000622058 1269 ntBASIC28.49■■■□□ 2.15
CASD1Q96PB1 DUX4L10-201ENST00000622460 1267 ntBASIC28.49■■■□□ 2.15
CASD1Q96PB1 DUX4L25-201ENST00000624915 1269 ntBASIC28.49■■■□□ 2.15
CASD1Q96PB1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.49■■■□□ 2.15
CASD1Q96PB1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CASD1Q96PB1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CASD1Q96PB1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
CASD1Q96PB1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CASD1Q96PB1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CASD1Q96PB1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CASD1Q96PB1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
CASD1Q96PB1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CASD1Q96PB1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.45■■■□□ 2.14
CASD1Q96PB1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.43■■■□□ 2.14
CASD1Q96PB1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.42■■■□□ 2.14
CASD1Q96PB1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CASD1Q96PB1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CASD1Q96PB1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CASD1Q96PB1 HSD17B1P1-201ENST00000590052 955 ntBASIC28.41■■■□□ 2.14
CASD1Q96PB1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CASD1Q96PB1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.4■■■□□ 2.14
CASD1Q96PB1 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.4■■■□□ 2.14
CASD1Q96PB1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CASD1Q96PB1 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.39■■■□□ 2.14
CASD1Q96PB1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
CASD1Q96PB1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.38■■■□□ 2.13
CASD1Q96PB1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CASD1Q96PB1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
CASD1Q96PB1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CASD1Q96PB1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.37■■■□□ 2.13
CASD1Q96PB1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CASD1Q96PB1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CASD1Q96PB1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
CASD1Q96PB1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CASD1Q96PB1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
CASD1Q96PB1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.34■■■□□ 2.13
CASD1Q96PB1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.34■■■□□ 2.13
CASD1Q96PB1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CASD1Q96PB1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
CASD1Q96PB1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.32■■■□□ 2.12
CASD1Q96PB1 AC010864.1-201ENST00000609407 1511 ntBASIC28.32■■■□□ 2.12
CASD1Q96PB1 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.31■■■□□ 2.12
CASD1Q96PB1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.31■■■□□ 2.12
CASD1Q96PB1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
CASD1Q96PB1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.3■■■□□ 2.12
CASD1Q96PB1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CASD1Q96PB1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.29■■■□□ 2.12
CASD1Q96PB1 LINC00273-201ENST00000539813 1452 ntBASIC28.28■■■□□ 2.12
CASD1Q96PB1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.28■■■□□ 2.12
CASD1Q96PB1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CASD1Q96PB1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.26■■■□□ 2.11
CASD1Q96PB1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
CASD1Q96PB1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.26■■■□□ 2.11
CASD1Q96PB1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CASD1Q96PB1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CASD1Q96PB1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CASD1Q96PB1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CASD1Q96PB1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms