Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PPP4R1Q8TF05 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.1■■□□□ 1.77
PPP4R1Q8TF05 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PPP4R1Q8TF05 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PPP4R1Q8TF05 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.09■■□□□ 1.77
PPP4R1Q8TF05 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PPP4R1Q8TF05 AC142086.6-201ENST00000621154 1765 ntBASIC26.08■■□□□ 1.77
PPP4R1Q8TF05 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PPP4R1Q8TF05 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.07■■□□□ 1.76
PPP4R1Q8TF05 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PPP4R1Q8TF05 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.07■■□□□ 1.76
PPP4R1Q8TF05 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PPP4R1Q8TF05 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PPP4R1Q8TF05 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
PPP4R1Q8TF05 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
PPP4R1Q8TF05 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R1Q8TF05 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.04■■□□□ 1.76
PPP4R1Q8TF05 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PPP4R1Q8TF05 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PPP4R1Q8TF05 SUZ12P1-203ENST00000578195 985 ntBASIC26.02■■□□□ 1.76
PPP4R1Q8TF05 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PPP4R1Q8TF05 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.76
PPP4R1Q8TF05 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R1Q8TF05 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.01■■□□□ 1.75
PPP4R1Q8TF05 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R1Q8TF05 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R1Q8TF05 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26■■□□□ 1.75
PPP4R1Q8TF05 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26■■□□□ 1.75
PPP4R1Q8TF05 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PPP4R1Q8TF05 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PPP4R1Q8TF05 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PPP4R1Q8TF05 WASH5P-204ENST00000632292 975 ntBASIC25.99■■□□□ 1.75
PPP4R1Q8TF05 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PPP4R1Q8TF05 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PPP4R1Q8TF05 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PPP4R1Q8TF05 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
PPP4R1Q8TF05 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.98■■□□□ 1.75
PPP4R1Q8TF05 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PPP4R1Q8TF05 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PPP4R1Q8TF05 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.98■■□□□ 1.75
PPP4R1Q8TF05 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PPP4R1Q8TF05 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.97■■□□□ 1.75
PPP4R1Q8TF05 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.97■■□□□ 1.75
PPP4R1Q8TF05 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PPP4R1Q8TF05 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PPP4R1Q8TF05 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PPP4R1Q8TF05 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PPP4R1Q8TF05 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PPP4R1Q8TF05 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
PPP4R1Q8TF05 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
PPP4R1Q8TF05 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PPP4R1Q8TF05 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PPP4R1Q8TF05 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.94■■□□□ 1.74
PPP4R1Q8TF05 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PPP4R1Q8TF05 AL133380.1-201ENST00000506013 324 ntBASIC25.94■■□□□ 1.74
PPP4R1Q8TF05 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.94■■□□□ 1.74
PPP4R1Q8TF05 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PPP4R1Q8TF05 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.93■■□□□ 1.74
PPP4R1Q8TF05 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PPP4R1Q8TF05 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PPP4R1Q8TF05 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PPP4R1Q8TF05 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PPP4R1Q8TF05 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PPP4R1Q8TF05 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PPP4R1Q8TF05 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.9■■□□□ 1.74
PPP4R1Q8TF05 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.9■■□□□ 1.74
PPP4R1Q8TF05 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PPP4R1Q8TF05 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PPP4R1Q8TF05 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
PPP4R1Q8TF05 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PPP4R1Q8TF05 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PPP4R1Q8TF05 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
PPP4R1Q8TF05 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PPP4R1Q8TF05 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PPP4R1Q8TF05 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PPP4R1Q8TF05 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PPP4R1Q8TF05 AL139393.2-201ENST00000608721 2025 ntBASIC25.86■■□□□ 1.73
PPP4R1Q8TF05 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PPP4R1Q8TF05 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
PPP4R1Q8TF05 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
PPP4R1Q8TF05 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
PPP4R1Q8TF05 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
PPP4R1Q8TF05 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
PPP4R1Q8TF05 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PPP4R1Q8TF05 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PPP4R1Q8TF05 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PPP4R1Q8TF05 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PPP4R1Q8TF05 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.8■■□□□ 1.72
PPP4R1Q8TF05 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PPP4R1Q8TF05 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PPP4R1Q8TF05 RPS2P35-201ENST00000443417 897 ntBASIC25.79■■□□□ 1.72
PPP4R1Q8TF05 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PPP4R1Q8TF05 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PPP4R1Q8TF05 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.78■■□□□ 1.72
PPP4R1Q8TF05 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PPP4R1Q8TF05 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
PPP4R1Q8TF05 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PPP4R1Q8TF05 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PPP4R1Q8TF05 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PPP4R1Q8TF05 CAHM-201ENST00000604200 896 ntBASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms