Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNIP1Q8TAD8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNIP1Q8TAD8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SNIP1Q8TAD8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
SNIP1Q8TAD8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.15■■□□□ 1.62
SNIP1Q8TAD8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.14■■□□□ 1.62
SNIP1Q8TAD8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SNIP1Q8TAD8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SNIP1Q8TAD8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNIP1Q8TAD8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNIP1Q8TAD8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SNIP1Q8TAD8 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.11■■□□□ 1.61
SNIP1Q8TAD8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SNIP1Q8TAD8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SNIP1Q8TAD8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
SNIP1Q8TAD8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.08■■□□□ 1.61
SNIP1Q8TAD8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
SNIP1Q8TAD8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SNIP1Q8TAD8 RNF126P1-201ENST00000567452 1320 ntBASIC25.07■■□□□ 1.6
SNIP1Q8TAD8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.06■■□□□ 1.6
SNIP1Q8TAD8 GPX1-201ENST00000419349 1106 ntBASIC25.06■■□□□ 1.6
SNIP1Q8TAD8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
SNIP1Q8TAD8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.06■■□□□ 1.6
SNIP1Q8TAD8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.06■■□□□ 1.6
SNIP1Q8TAD8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.05■■□□□ 1.6
SNIP1Q8TAD8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SNIP1Q8TAD8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SNIP1Q8TAD8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SNIP1Q8TAD8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SNIP1Q8TAD8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SNIP1Q8TAD8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SNIP1Q8TAD8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNIP1Q8TAD8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SNIP1Q8TAD8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNIP1Q8TAD8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
SNIP1Q8TAD8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNIP1Q8TAD8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SNIP1Q8TAD8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
SNIP1Q8TAD8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
SNIP1Q8TAD8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
SNIP1Q8TAD8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25■■□□□ 1.59
SNIP1Q8TAD8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25■■□□□ 1.59
SNIP1Q8TAD8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25■■□□□ 1.59
SNIP1Q8TAD8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNIP1Q8TAD8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.99■■□□□ 1.59
SNIP1Q8TAD8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
SNIP1Q8TAD8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
SNIP1Q8TAD8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
SNIP1Q8TAD8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SNIP1Q8TAD8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SNIP1Q8TAD8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNIP1Q8TAD8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.94■■□□□ 1.58
SNIP1Q8TAD8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNIP1Q8TAD8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNIP1Q8TAD8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SNIP1Q8TAD8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNIP1Q8TAD8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC24.92■■□□□ 1.58
SNIP1Q8TAD8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.92■■□□□ 1.58
SNIP1Q8TAD8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNIP1Q8TAD8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.91■■□□□ 1.58
SNIP1Q8TAD8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.91■■□□□ 1.58
SNIP1Q8TAD8 NTF6A-201ENST00000591175 560 ntBASIC24.91■■□□□ 1.58
SNIP1Q8TAD8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
SNIP1Q8TAD8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNIP1Q8TAD8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
SNIP1Q8TAD8 AC012354.3-201ENST00000623734 483 ntBASIC24.9■■□□□ 1.58
SNIP1Q8TAD8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.89■■□□□ 1.58
SNIP1Q8TAD8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SNIP1Q8TAD8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
SNIP1Q8TAD8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.89■■□□□ 1.58
SNIP1Q8TAD8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.89■■□□□ 1.58
SNIP1Q8TAD8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SNIP1Q8TAD8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
SNIP1Q8TAD8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
SNIP1Q8TAD8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
SNIP1Q8TAD8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
SNIP1Q8TAD8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.88■■□□□ 1.57
SNIP1Q8TAD8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
SNIP1Q8TAD8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.86■■□□□ 1.57
SNIP1Q8TAD8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SNIP1Q8TAD8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SNIP1Q8TAD8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SNIP1Q8TAD8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.81■■□□□ 1.56
SNIP1Q8TAD8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.8■■□□□ 1.56
SNIP1Q8TAD8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.8■■□□□ 1.56
SNIP1Q8TAD8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.79■■□□□ 1.56
SNIP1Q8TAD8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.79■■□□□ 1.56
SNIP1Q8TAD8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.79■■□□□ 1.56
SNIP1Q8TAD8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.79■■□□□ 1.56
SNIP1Q8TAD8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
SNIP1Q8TAD8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
SNIP1Q8TAD8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SNIP1Q8TAD8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.78■■□□□ 1.56
SNIP1Q8TAD8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNIP1Q8TAD8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SNIP1Q8TAD8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SNIP1Q8TAD8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SNIP1Q8TAD8 AC022413.1-201ENST00000624602 984 ntBASIC24.76■■□□□ 1.55
SNIP1Q8TAD8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNIP1Q8TAD8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms