Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNIP1Q8TAD8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNIP1Q8TAD8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SNIP1Q8TAD8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
SNIP1Q8TAD8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.15■■□□□ 1.62
SNIP1Q8TAD8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.14■■□□□ 1.62
SNIP1Q8TAD8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SNIP1Q8TAD8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SNIP1Q8TAD8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNIP1Q8TAD8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNIP1Q8TAD8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SNIP1Q8TAD8 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.11■■□□□ 1.61
SNIP1Q8TAD8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SNIP1Q8TAD8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SNIP1Q8TAD8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
SNIP1Q8TAD8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.08■■□□□ 1.61
SNIP1Q8TAD8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
SNIP1Q8TAD8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SNIP1Q8TAD8 RNF126P1-201ENST00000567452 1320 ntBASIC25.07■■□□□ 1.6
SNIP1Q8TAD8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.06■■□□□ 1.6
SNIP1Q8TAD8 GPX1-201ENST00000419349 1106 ntBASIC25.06■■□□□ 1.6
SNIP1Q8TAD8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
SNIP1Q8TAD8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.06■■□□□ 1.6
SNIP1Q8TAD8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.06■■□□□ 1.6
SNIP1Q8TAD8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.05■■□□□ 1.6
SNIP1Q8TAD8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SNIP1Q8TAD8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SNIP1Q8TAD8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SNIP1Q8TAD8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SNIP1Q8TAD8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SNIP1Q8TAD8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SNIP1Q8TAD8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNIP1Q8TAD8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SNIP1Q8TAD8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNIP1Q8TAD8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
SNIP1Q8TAD8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNIP1Q8TAD8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SNIP1Q8TAD8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
SNIP1Q8TAD8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
SNIP1Q8TAD8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
SNIP1Q8TAD8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25■■□□□ 1.59
SNIP1Q8TAD8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25■■□□□ 1.59
SNIP1Q8TAD8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25■■□□□ 1.59
SNIP1Q8TAD8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNIP1Q8TAD8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.99■■□□□ 1.59
SNIP1Q8TAD8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
SNIP1Q8TAD8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
SNIP1Q8TAD8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
SNIP1Q8TAD8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SNIP1Q8TAD8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SNIP1Q8TAD8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNIP1Q8TAD8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.94■■□□□ 1.58
SNIP1Q8TAD8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNIP1Q8TAD8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNIP1Q8TAD8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SNIP1Q8TAD8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNIP1Q8TAD8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC24.92■■□□□ 1.58
SNIP1Q8TAD8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.92■■□□□ 1.58
SNIP1Q8TAD8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNIP1Q8TAD8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.91■■□□□ 1.58
SNIP1Q8TAD8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.91■■□□□ 1.58
SNIP1Q8TAD8 NTF6A-201ENST00000591175 560 ntBASIC24.91■■□□□ 1.58
SNIP1Q8TAD8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
SNIP1Q8TAD8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNIP1Q8TAD8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
SNIP1Q8TAD8 AC012354.3-201ENST00000623734 483 ntBASIC24.9■■□□□ 1.58
SNIP1Q8TAD8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.89■■□□□ 1.58
SNIP1Q8TAD8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SNIP1Q8TAD8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
SNIP1Q8TAD8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.89■■□□□ 1.58
SNIP1Q8TAD8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.89■■□□□ 1.58
SNIP1Q8TAD8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SNIP1Q8TAD8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
SNIP1Q8TAD8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
SNIP1Q8TAD8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
SNIP1Q8TAD8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
SNIP1Q8TAD8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.88■■□□□ 1.57
SNIP1Q8TAD8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
SNIP1Q8TAD8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.86■■□□□ 1.57
SNIP1Q8TAD8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SNIP1Q8TAD8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SNIP1Q8TAD8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SNIP1Q8TAD8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.81■■□□□ 1.56
SNIP1Q8TAD8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.8■■□□□ 1.56
SNIP1Q8TAD8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.8■■□□□ 1.56
SNIP1Q8TAD8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.79■■□□□ 1.56
SNIP1Q8TAD8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.79■■□□□ 1.56
SNIP1Q8TAD8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.79■■□□□ 1.56
SNIP1Q8TAD8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.79■■□□□ 1.56
SNIP1Q8TAD8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
SNIP1Q8TAD8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
SNIP1Q8TAD8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SNIP1Q8TAD8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.78■■□□□ 1.56
SNIP1Q8TAD8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNIP1Q8TAD8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SNIP1Q8TAD8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SNIP1Q8TAD8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SNIP1Q8TAD8 AC022413.1-201ENST00000624602 984 ntBASIC24.76■■□□□ 1.55
SNIP1Q8TAD8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNIP1Q8TAD8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms