Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPTSSBQ8NFR3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPTSSBQ8NFR3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPTSSBQ8NFR3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.62□□□□□ -0.07
SPTSSBQ8NFR3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC14.61□□□□□ -0.07
SPTSSBQ8NFR3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPTSSBQ8NFR3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPTSSBQ8NFR3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SPTSSBQ8NFR3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
SPTSSBQ8NFR3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.59□□□□□ -0.07
SPTSSBQ8NFR3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPTSSBQ8NFR3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPTSSBQ8NFR3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPTSSBQ8NFR3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
SPTSSBQ8NFR3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SPTSSBQ8NFR3 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPTSSBQ8NFR3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC14.58□□□□□ -0.08
SPTSSBQ8NFR3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPTSSBQ8NFR3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPTSSBQ8NFR3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
SPTSSBQ8NFR3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPTSSBQ8NFR3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SPTSSBQ8NFR3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTSSBQ8NFR3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SPTSSBQ8NFR3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPTSSBQ8NFR3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SPTSSBQ8NFR3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
SPTSSBQ8NFR3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPTSSBQ8NFR3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.56□□□□□ -0.08
SPTSSBQ8NFR3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.55□□□□□ -0.08
SPTSSBQ8NFR3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPTSSBQ8NFR3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SPTSSBQ8NFR3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPTSSBQ8NFR3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPTSSBQ8NFR3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPTSSBQ8NFR3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPTSSBQ8NFR3 PKD1P6-201ENST00000343738 4769 ntBASIC14.54□□□□□ -0.08
SPTSSBQ8NFR3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPTSSBQ8NFR3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
SPTSSBQ8NFR3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
SPTSSBQ8NFR3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SPTSSBQ8NFR3 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPTSSBQ8NFR3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPTSSBQ8NFR3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SPTSSBQ8NFR3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SPTSSBQ8NFR3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPTSSBQ8NFR3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPTSSBQ8NFR3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SPTSSBQ8NFR3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPTSSBQ8NFR3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC14.51□□□□□ -0.09
SPTSSBQ8NFR3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SPTSSBQ8NFR3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPTSSBQ8NFR3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPTSSBQ8NFR3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPTSSBQ8NFR3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTSSBQ8NFR3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SPTSSBQ8NFR3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC14.5□□□□□ -0.09
SPTSSBQ8NFR3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPTSSBQ8NFR3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTSSBQ8NFR3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPTSSBQ8NFR3 ABCB10P3-201ENST00000561950 2166 ntBASIC14.49□□□□□ -0.09
SPTSSBQ8NFR3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPTSSBQ8NFR3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
SPTSSBQ8NFR3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SPTSSBQ8NFR3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SPTSSBQ8NFR3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
SPTSSBQ8NFR3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC14.48□□□□□ -0.09
SPTSSBQ8NFR3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPTSSBQ8NFR3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SPTSSBQ8NFR3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTSSBQ8NFR3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPTSSBQ8NFR3 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTSSBQ8NFR3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC14.46□□□□□ -0.09
SPTSSBQ8NFR3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTSSBQ8NFR3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPTSSBQ8NFR3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SPTSSBQ8NFR3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPTSSBQ8NFR3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SPTSSBQ8NFR3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPTSSBQ8NFR3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPTSSBQ8NFR3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.45□□□□□ -0.1
SPTSSBQ8NFR3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSBQ8NFR3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSBQ8NFR3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SPTSSBQ8NFR3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSBQ8NFR3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSBQ8NFR3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSBQ8NFR3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SPTSSBQ8NFR3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSBQ8NFR3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SPTSSBQ8NFR3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSBQ8NFR3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSBQ8NFR3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSBQ8NFR3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSBQ8NFR3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSBQ8NFR3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSBQ8NFR3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPTSSBQ8NFR3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SPTSSBQ8NFR3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
SPTSSBQ8NFR3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms