Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 DUX4L22-201ENST00000618238 1269 ntBASIC27.02■■□□□ 1.92
SYNPOQ8N3V7 DUX4L20-201ENST00000619712 1269 ntBASIC27.02■■□□□ 1.92
SYNPOQ8N3V7 DUX4L21-201ENST00000622058 1269 ntBASIC27.02■■□□□ 1.92
SYNPOQ8N3V7 DUX4L10-201ENST00000622460 1267 ntBASIC27.02■■□□□ 1.92
SYNPOQ8N3V7 DUX4L25-201ENST00000624915 1269 ntBASIC27.02■■□□□ 1.92
SYNPOQ8N3V7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.01■■□□□ 1.91
SYNPOQ8N3V7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SYNPOQ8N3V7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SYNPOQ8N3V7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SYNPOQ8N3V7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.99■■□□□ 1.91
SYNPOQ8N3V7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.99■■□□□ 1.91
SYNPOQ8N3V7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.98■■□□□ 1.91
SYNPOQ8N3V7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SYNPOQ8N3V7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
SYNPOQ8N3V7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.97■■□□□ 1.91
SYNPOQ8N3V7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SYNPOQ8N3V7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
SYNPOQ8N3V7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SYNPOQ8N3V7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
SYNPOQ8N3V7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.94■■□□□ 1.9
SYNPOQ8N3V7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SYNPOQ8N3V7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
SYNPOQ8N3V7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SYNPOQ8N3V7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SYNPOQ8N3V7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.93■■□□□ 1.9
SYNPOQ8N3V7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
SYNPOQ8N3V7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SYNPOQ8N3V7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SYNPOQ8N3V7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SYNPOQ8N3V7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SYNPOQ8N3V7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.92■■□□□ 1.9
SYNPOQ8N3V7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.92■■□□□ 1.9
SYNPOQ8N3V7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SYNPOQ8N3V7 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.91■■□□□ 1.9
SYNPOQ8N3V7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.9■■□□□ 1.9
SYNPOQ8N3V7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SYNPOQ8N3V7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SYNPOQ8N3V7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.89■■□□□ 1.9
SYNPOQ8N3V7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.88■■□□□ 1.89
SYNPOQ8N3V7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SYNPOQ8N3V7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SYNPOQ8N3V7 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.87■■□□□ 1.89
SYNPOQ8N3V7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SYNPOQ8N3V7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.86■■□□□ 1.89
SYNPOQ8N3V7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SYNPOQ8N3V7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SYNPOQ8N3V7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SYNPOQ8N3V7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SYNPOQ8N3V7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.83■■□□□ 1.89
SYNPOQ8N3V7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.83■■□□□ 1.89
SYNPOQ8N3V7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
SYNPOQ8N3V7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SYNPOQ8N3V7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
SYNPOQ8N3V7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SYNPOQ8N3V7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.8■■□□□ 1.88
SYNPOQ8N3V7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.79■■□□□ 1.88
SYNPOQ8N3V7 AC120057.4-201ENST00000624722 1615 ntBASIC26.79■■□□□ 1.88
SYNPOQ8N3V7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SYNPOQ8N3V7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SYNPOQ8N3V7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.78■■□□□ 1.88
SYNPOQ8N3V7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SYNPOQ8N3V7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SYNPOQ8N3V7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SYNPOQ8N3V7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SYNPOQ8N3V7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SYNPOQ8N3V7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SYNPOQ8N3V7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SYNPOQ8N3V7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SYNPOQ8N3V7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SYNPOQ8N3V7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SYNPOQ8N3V7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
SYNPOQ8N3V7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.76■■□□□ 1.87
SYNPOQ8N3V7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.76■■□□□ 1.87
SYNPOQ8N3V7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SYNPOQ8N3V7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.75■■□□□ 1.87
SYNPOQ8N3V7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
SYNPOQ8N3V7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SYNPOQ8N3V7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.74■■□□□ 1.87
SYNPOQ8N3V7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
SYNPOQ8N3V7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.73■■□□□ 1.87
SYNPOQ8N3V7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.73■■□□□ 1.87
SYNPOQ8N3V7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.73■■□□□ 1.87
SYNPOQ8N3V7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
SYNPOQ8N3V7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.72■■□□□ 1.87
SYNPOQ8N3V7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.72■■□□□ 1.87
SYNPOQ8N3V7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.71■■□□□ 1.87
SYNPOQ8N3V7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.71■■□□□ 1.87
SYNPOQ8N3V7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
SYNPOQ8N3V7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
SYNPOQ8N3V7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
SYNPOQ8N3V7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.7■■□□□ 1.86
SYNPOQ8N3V7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SYNPOQ8N3V7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SYNPOQ8N3V7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SYNPOQ8N3V7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
SYNPOQ8N3V7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SYNPOQ8N3V7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SYNPOQ8N3V7 RARRES2P2-201ENST00000394842 485 ntBASIC26.67■■□□□ 1.86
SYNPOQ8N3V7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.67■■□□□ 1.86
SYNPOQ8N3V7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms