Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC38.71■■■■□ 3.79
UBR1Q8IWV7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC38.71■■■■□ 3.79
UBR1Q8IWV7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC38.69■■■■□ 3.78
UBR1Q8IWV7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
UBR1Q8IWV7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC38.68■■■■□ 3.78
UBR1Q8IWV7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
UBR1Q8IWV7 ABHD17AP5-201ENST00000580133 923 ntBASIC38.66■■■■□ 3.78
UBR1Q8IWV7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
UBR1Q8IWV7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC38.64■■■■□ 3.78
UBR1Q8IWV7 HES6-205ENST00000409356 528 ntTSL 2 BASIC38.63■■■■□ 3.78
UBR1Q8IWV7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC38.61■■■■□ 3.77
UBR1Q8IWV7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
UBR1Q8IWV7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC38.6■■■■□ 3.77
UBR1Q8IWV7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC38.59■■■■□ 3.77
UBR1Q8IWV7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
UBR1Q8IWV7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC38.58■■■■□ 3.77
UBR1Q8IWV7 CHML-204ENST00000638121 920 ntTSL 2 BASIC38.58■■■■□ 3.77
UBR1Q8IWV7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC38.58■■■■□ 3.77
UBR1Q8IWV7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
UBR1Q8IWV7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC38.58■■■■□ 3.77
UBR1Q8IWV7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
UBR1Q8IWV7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC38.56■■■■□ 3.76
UBR1Q8IWV7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC38.56■■■■□ 3.76
UBR1Q8IWV7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
UBR1Q8IWV7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
UBR1Q8IWV7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
UBR1Q8IWV7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
UBR1Q8IWV7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
UBR1Q8IWV7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC38.55■■■■□ 3.76
UBR1Q8IWV7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC38.55■■■■□ 3.76
UBR1Q8IWV7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC38.55■■■■□ 3.76
UBR1Q8IWV7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
UBR1Q8IWV7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC38.53■■■■□ 3.76
UBR1Q8IWV7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC38.53■■■■□ 3.76
UBR1Q8IWV7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC38.53■■■■□ 3.76
UBR1Q8IWV7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
UBR1Q8IWV7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
UBR1Q8IWV7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC38.48■■■■□ 3.75
UBR1Q8IWV7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
UBR1Q8IWV7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC38.46■■■■□ 3.75
UBR1Q8IWV7 GPX1-201ENST00000419349 1106 ntBASIC38.46■■■■□ 3.75
UBR1Q8IWV7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
UBR1Q8IWV7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC38.46■■■■□ 3.75
UBR1Q8IWV7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC38.45■■■■□ 3.75
UBR1Q8IWV7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
UBR1Q8IWV7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC38.44■■■■□ 3.74
UBR1Q8IWV7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC38.43■■■■□ 3.74
UBR1Q8IWV7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
UBR1Q8IWV7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
UBR1Q8IWV7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC38.41■■■■□ 3.74
UBR1Q8IWV7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC38.4■■■■□ 3.74
UBR1Q8IWV7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC38.4■■■■□ 3.74
UBR1Q8IWV7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC38.39■■■■□ 3.74
UBR1Q8IWV7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC38.39■■■■□ 3.74
UBR1Q8IWV7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC38.38■■■■□ 3.74
UBR1Q8IWV7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC38.38■■■■□ 3.74
UBR1Q8IWV7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
UBR1Q8IWV7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
UBR1Q8IWV7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
UBR1Q8IWV7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC38.36■■■■□ 3.73
UBR1Q8IWV7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC38.33■■■■□ 3.73
UBR1Q8IWV7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC38.32■■■■□ 3.73
UBR1Q8IWV7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC38.31■■■■□ 3.72
UBR1Q8IWV7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC38.31■■■■□ 3.72
UBR1Q8IWV7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC38.28■■■■□ 3.72
UBR1Q8IWV7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC38.27■■■■□ 3.72
UBR1Q8IWV7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC38.27■■■■□ 3.72
UBR1Q8IWV7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC38.26■■■■□ 3.72
UBR1Q8IWV7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC38.26■■■■□ 3.72
UBR1Q8IWV7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC38.26■■■■□ 3.72
UBR1Q8IWV7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC38.26■■■■□ 3.71
UBR1Q8IWV7 RNF126P1-201ENST00000567452 1320 ntBASIC38.25■■■■□ 3.71
UBR1Q8IWV7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC38.25■■■■□ 3.71
UBR1Q8IWV7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC38.24■■■■□ 3.71
UBR1Q8IWV7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
UBR1Q8IWV7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC38.24■■■■□ 3.71
UBR1Q8IWV7 LINC00273-201ENST00000539813 1452 ntBASIC38.23■■■■□ 3.71
UBR1Q8IWV7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC38.23■■■■□ 3.71
UBR1Q8IWV7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC38.23■■■■□ 3.71
UBR1Q8IWV7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC38.23■■■■□ 3.71
UBR1Q8IWV7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC38.23■■■■□ 3.71
UBR1Q8IWV7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
UBR1Q8IWV7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
UBR1Q8IWV7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
UBR1Q8IWV7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC38.2■■■■□ 3.71
UBR1Q8IWV7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC38.18■■■■□ 3.7
UBR1Q8IWV7 NTF6A-201ENST00000591175 560 ntBASIC38.18■■■■□ 3.7
UBR1Q8IWV7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
UBR1Q8IWV7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC38.17■■■■□ 3.7
UBR1Q8IWV7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC38.15■■■■□ 3.7
UBR1Q8IWV7 AC012354.3-201ENST00000623734 483 ntBASIC38.15■■■■□ 3.7
UBR1Q8IWV7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC38.14■■■■□ 3.7
UBR1Q8IWV7 AC120057.4-201ENST00000624722 1615 ntBASIC38.14■■■■□ 3.7
UBR1Q8IWV7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC38.13■■■■□ 3.69
UBR1Q8IWV7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
UBR1Q8IWV7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
UBR1Q8IWV7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
UBR1Q8IWV7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
UBR1Q8IWV7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
UBR1Q8IWV7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms