Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.6■■■□□ 2.33
TRIM50Q86XT4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TRIM50Q86XT4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.58■■■□□ 2.33
TRIM50Q86XT4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
TRIM50Q86XT4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
TRIM50Q86XT4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
TRIM50Q86XT4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
TRIM50Q86XT4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
TRIM50Q86XT4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
TRIM50Q86XT4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
TRIM50Q86XT4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.55■■■□□ 2.32
TRIM50Q86XT4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.52■■■□□ 2.32
TRIM50Q86XT4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.52■■■□□ 2.32
TRIM50Q86XT4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.51■■■□□ 2.31
TRIM50Q86XT4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
TRIM50Q86XT4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
TRIM50Q86XT4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
TRIM50Q86XT4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
TRIM50Q86XT4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.47■■■□□ 2.31
TRIM50Q86XT4 LINC01971-201ENST00000617888 1048 ntBASIC29.47■■■□□ 2.31
TRIM50Q86XT4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TRIM50Q86XT4 DUX4L11-201ENST00000611504 1267 ntBASIC29.46■■■□□ 2.31
TRIM50Q86XT4 DUX4L12-201ENST00000614593 1267 ntBASIC29.46■■■□□ 2.31
TRIM50Q86XT4 DUX4L14-201ENST00000621227 1267 ntBASIC29.46■■■□□ 2.31
TRIM50Q86XT4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
TRIM50Q86XT4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.44■■■□□ 2.3
TRIM50Q86XT4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.44■■■□□ 2.3
TRIM50Q86XT4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TRIM50Q86XT4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TRIM50Q86XT4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.42■■■□□ 2.3
TRIM50Q86XT4 MIR3648-2-201ENST00000581792 180 ntBASIC29.42■■■□□ 2.3
TRIM50Q86XT4 AC016575.1-201ENST00000607026 382 ntBASIC29.42■■■□□ 2.3
TRIM50Q86XT4 MIR3648-1-201ENST00000615959 180 ntBASIC29.42■■■□□ 2.3
TRIM50Q86XT4 CR559946.2-201ENST00000623684 991 ntBASIC29.42■■■□□ 2.3
TRIM50Q86XT4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
TRIM50Q86XT4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.41■■■□□ 2.3
TRIM50Q86XT4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
TRIM50Q86XT4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.4■■■□□ 2.3
TRIM50Q86XT4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
TRIM50Q86XT4 AC010864.1-201ENST00000609407 1511 ntBASIC29.4■■■□□ 2.3
TRIM50Q86XT4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
TRIM50Q86XT4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
TRIM50Q86XT4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
TRIM50Q86XT4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
TRIM50Q86XT4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.39■■■□□ 2.3
TRIM50Q86XT4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
TRIM50Q86XT4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.37■■■□□ 2.29
TRIM50Q86XT4 MIR639-201ENST00000384974 98 ntBASIC29.37■■■□□ 2.29
TRIM50Q86XT4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.37■■■□□ 2.29
TRIM50Q86XT4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.37■■■□□ 2.29
TRIM50Q86XT4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.36■■■□□ 2.29
TRIM50Q86XT4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
TRIM50Q86XT4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
TRIM50Q86XT4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
TRIM50Q86XT4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.35■■■□□ 2.29
TRIM50Q86XT4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
TRIM50Q86XT4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.34■■■□□ 2.29
TRIM50Q86XT4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.33■■■□□ 2.29
TRIM50Q86XT4 MIR4449-201ENST00000578365 66 ntBASIC29.33■■■□□ 2.29
TRIM50Q86XT4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
TRIM50Q86XT4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.32■■■□□ 2.28
TRIM50Q86XT4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.31■■■□□ 2.28
TRIM50Q86XT4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
TRIM50Q86XT4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
TRIM50Q86XT4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TRIM50Q86XT4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TRIM50Q86XT4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TRIM50Q86XT4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.29■■■□□ 2.28
TRIM50Q86XT4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.29■■■□□ 2.28
TRIM50Q86XT4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.29■■■□□ 2.28
TRIM50Q86XT4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM50Q86XT4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM50Q86XT4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM50Q86XT4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
TRIM50Q86XT4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TRIM50Q86XT4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TRIM50Q86XT4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
TRIM50Q86XT4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
TRIM50Q86XT4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.26■■■□□ 2.27
TRIM50Q86XT4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.26■■■□□ 2.27
TRIM50Q86XT4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
TRIM50Q86XT4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
TRIM50Q86XT4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
TRIM50Q86XT4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
TRIM50Q86XT4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
TRIM50Q86XT4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
TRIM50Q86XT4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.24■■■□□ 2.27
TRIM50Q86XT4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
TRIM50Q86XT4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
TRIM50Q86XT4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
TRIM50Q86XT4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.22■■■□□ 2.27
TRIM50Q86XT4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.22■■■□□ 2.27
TRIM50Q86XT4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.22■■■□□ 2.27
TRIM50Q86XT4 DUX4L13-201ENST00000554103 1267 ntBASIC29.22■■■□□ 2.27
TRIM50Q86XT4 DUX4L15-201ENST00000611059 1267 ntBASIC29.22■■■□□ 2.27
TRIM50Q86XT4 DUX4L23-201ENST00000615195 1269 ntBASIC29.22■■■□□ 2.27
TRIM50Q86XT4 DUX4L24-201ENST00000617576 1269 ntBASIC29.22■■■□□ 2.27
TRIM50Q86XT4 DUX4L22-201ENST00000618238 1269 ntBASIC29.22■■■□□ 2.27
TRIM50Q86XT4 DUX4L20-201ENST00000619712 1269 ntBASIC29.22■■■□□ 2.27
TRIM50Q86XT4 DUX4L21-201ENST00000622058 1269 ntBASIC29.22■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms