Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RAB11FIP1Q6WKZ4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
RAB11FIP1Q6WKZ4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.54■■□□□ 1.84
RAB11FIP1Q6WKZ4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RAB11FIP1Q6WKZ4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.53■■□□□ 1.84
RAB11FIP1Q6WKZ4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RAB11FIP1Q6WKZ4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
RAB11FIP1Q6WKZ4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.53■■□□□ 1.84
RAB11FIP1Q6WKZ4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
RAB11FIP1Q6WKZ4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RAB11FIP1Q6WKZ4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RAB11FIP1Q6WKZ4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RAB11FIP1Q6WKZ4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RAB11FIP1Q6WKZ4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RAB11FIP1Q6WKZ4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RAB11FIP1Q6WKZ4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
RAB11FIP1Q6WKZ4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.49■■□□□ 1.83
RAB11FIP1Q6WKZ4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAB11FIP1Q6WKZ4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAB11FIP1Q6WKZ4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.48■■□□□ 1.83
RAB11FIP1Q6WKZ4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
RAB11FIP1Q6WKZ4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.46■■□□□ 1.83
RAB11FIP1Q6WKZ4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RAB11FIP1Q6WKZ4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
RAB11FIP1Q6WKZ4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.43■■□□□ 1.82
RAB11FIP1Q6WKZ4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
RAB11FIP1Q6WKZ4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.42■■□□□ 1.82
RAB11FIP1Q6WKZ4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.42■■□□□ 1.82
RAB11FIP1Q6WKZ4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RAB11FIP1Q6WKZ4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RAB11FIP1Q6WKZ4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RAB11FIP1Q6WKZ4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RAB11FIP1Q6WKZ4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RAB11FIP1Q6WKZ4 LINC01971-201ENST00000617888 1048 ntBASIC26.4■■□□□ 1.82
RAB11FIP1Q6WKZ4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
RAB11FIP1Q6WKZ4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RAB11FIP1Q6WKZ4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RAB11FIP1Q6WKZ4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.39■■□□□ 1.82
RAB11FIP1Q6WKZ4 DUX4L11-201ENST00000611504 1267 ntBASIC26.39■■□□□ 1.82
RAB11FIP1Q6WKZ4 DUX4L12-201ENST00000614593 1267 ntBASIC26.39■■□□□ 1.82
RAB11FIP1Q6WKZ4 DUX4L14-201ENST00000621227 1267 ntBASIC26.39■■□□□ 1.82
RAB11FIP1Q6WKZ4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.39■■□□□ 1.81
RAB11FIP1Q6WKZ4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.37■■□□□ 1.81
RAB11FIP1Q6WKZ4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RAB11FIP1Q6WKZ4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.37■■□□□ 1.81
RAB11FIP1Q6WKZ4 AC010864.1-201ENST00000609407 1511 ntBASIC26.36■■□□□ 1.81
RAB11FIP1Q6WKZ4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RAB11FIP1Q6WKZ4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.36■■□□□ 1.81
RAB11FIP1Q6WKZ4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.36■■□□□ 1.81
RAB11FIP1Q6WKZ4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.36■■□□□ 1.81
RAB11FIP1Q6WKZ4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.36■■□□□ 1.81
RAB11FIP1Q6WKZ4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
RAB11FIP1Q6WKZ4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RAB11FIP1Q6WKZ4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.35■■□□□ 1.81
RAB11FIP1Q6WKZ4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.34■■□□□ 1.81
RAB11FIP1Q6WKZ4 MIR3648-2-201ENST00000581792 180 ntBASIC26.34■■□□□ 1.81
RAB11FIP1Q6WKZ4 MIR3648-1-201ENST00000615959 180 ntBASIC26.34■■□□□ 1.81
RAB11FIP1Q6WKZ4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.34■■□□□ 1.81
RAB11FIP1Q6WKZ4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.33■■□□□ 1.81
RAB11FIP1Q6WKZ4 AC016575.1-201ENST00000607026 382 ntBASIC26.33■■□□□ 1.81
RAB11FIP1Q6WKZ4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.32■■□□□ 1.8
RAB11FIP1Q6WKZ4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RAB11FIP1Q6WKZ4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
RAB11FIP1Q6WKZ4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RAB11FIP1Q6WKZ4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RAB11FIP1Q6WKZ4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.3■■□□□ 1.8
RAB11FIP1Q6WKZ4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
RAB11FIP1Q6WKZ4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RAB11FIP1Q6WKZ4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAB11FIP1Q6WKZ4 MIR639-201ENST00000384974 98 ntBASIC26.29■■□□□ 1.8
RAB11FIP1Q6WKZ4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.29■■□□□ 1.8
RAB11FIP1Q6WKZ4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RAB11FIP1Q6WKZ4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.28■■□□□ 1.8
RAB11FIP1Q6WKZ4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RAB11FIP1Q6WKZ4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.27■■□□□ 1.8
RAB11FIP1Q6WKZ4 CR559946.2-201ENST00000623684 991 ntBASIC26.27■■□□□ 1.8
RAB11FIP1Q6WKZ4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RAB11FIP1Q6WKZ4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RAB11FIP1Q6WKZ4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RAB11FIP1Q6WKZ4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
RAB11FIP1Q6WKZ4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RAB11FIP1Q6WKZ4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RAB11FIP1Q6WKZ4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
RAB11FIP1Q6WKZ4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.25■■□□□ 1.79
RAB11FIP1Q6WKZ4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.25■■□□□ 1.79
RAB11FIP1Q6WKZ4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RAB11FIP1Q6WKZ4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RAB11FIP1Q6WKZ4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
RAB11FIP1Q6WKZ4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
RAB11FIP1Q6WKZ4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.23■■□□□ 1.79
RAB11FIP1Q6WKZ4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RAB11FIP1Q6WKZ4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RAB11FIP1Q6WKZ4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RAB11FIP1Q6WKZ4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RAB11FIP1Q6WKZ4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.21■■□□□ 1.79
RAB11FIP1Q6WKZ4 MIR4449-201ENST00000578365 66 ntBASIC26.21■■□□□ 1.79
RAB11FIP1Q6WKZ4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RAB11FIP1Q6WKZ4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RAB11FIP1Q6WKZ4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RAB11FIP1Q6WKZ4 DUX4L13-201ENST00000554103 1267 ntBASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms