Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
DCLRE1AQ6PJP8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
DCLRE1AQ6PJP8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
DCLRE1AQ6PJP8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
DCLRE1AQ6PJP8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.35■■■□□ 2.13
DCLRE1AQ6PJP8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
DCLRE1AQ6PJP8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.34■■■□□ 2.13
DCLRE1AQ6PJP8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
DCLRE1AQ6PJP8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
DCLRE1AQ6PJP8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
DCLRE1AQ6PJP8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.33■■■□□ 2.13
DCLRE1AQ6PJP8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.33■■■□□ 2.13
DCLRE1AQ6PJP8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
DCLRE1AQ6PJP8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
DCLRE1AQ6PJP8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
DCLRE1AQ6PJP8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
DCLRE1AQ6PJP8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
DCLRE1AQ6PJP8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
DCLRE1AQ6PJP8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.3■■■□□ 2.12
DCLRE1AQ6PJP8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.3■■■□□ 2.12
DCLRE1AQ6PJP8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
DCLRE1AQ6PJP8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.28■■■□□ 2.12
DCLRE1AQ6PJP8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
DCLRE1AQ6PJP8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
DCLRE1AQ6PJP8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
DCLRE1AQ6PJP8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
DCLRE1AQ6PJP8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
DCLRE1AQ6PJP8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.25■■■□□ 2.11
DCLRE1AQ6PJP8 LINC01971-201ENST00000617888 1048 ntBASIC28.25■■■□□ 2.11
DCLRE1AQ6PJP8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.25■■■□□ 2.11
DCLRE1AQ6PJP8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
DCLRE1AQ6PJP8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
DCLRE1AQ6PJP8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
DCLRE1AQ6PJP8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
DCLRE1AQ6PJP8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.22■■■□□ 2.11
DCLRE1AQ6PJP8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.21■■■□□ 2.11
DCLRE1AQ6PJP8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
DCLRE1AQ6PJP8 AC010864.1-201ENST00000609407 1511 ntBASIC28.21■■■□□ 2.11
DCLRE1AQ6PJP8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
DCLRE1AQ6PJP8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.2■■■□□ 2.1
DCLRE1AQ6PJP8 DUX4L11-201ENST00000611504 1267 ntBASIC28.2■■■□□ 2.1
DCLRE1AQ6PJP8 DUX4L12-201ENST00000614593 1267 ntBASIC28.2■■■□□ 2.1
DCLRE1AQ6PJP8 DUX4L14-201ENST00000621227 1267 ntBASIC28.2■■■□□ 2.1
DCLRE1AQ6PJP8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.18■■■□□ 2.1
DCLRE1AQ6PJP8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
DCLRE1AQ6PJP8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
DCLRE1AQ6PJP8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.17■■■□□ 2.1
DCLRE1AQ6PJP8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
DCLRE1AQ6PJP8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
DCLRE1AQ6PJP8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.16■■■□□ 2.1
DCLRE1AQ6PJP8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.16■■■□□ 2.1
DCLRE1AQ6PJP8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
DCLRE1AQ6PJP8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
DCLRE1AQ6PJP8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.15■■■□□ 2.1
DCLRE1AQ6PJP8 MIR3648-2-201ENST00000581792 180 ntBASIC28.15■■■□□ 2.1
DCLRE1AQ6PJP8 MIR3648-1-201ENST00000615959 180 ntBASIC28.15■■■□□ 2.1
DCLRE1AQ6PJP8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
DCLRE1AQ6PJP8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.14■■■□□ 2.1
DCLRE1AQ6PJP8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.13■■■□□ 2.09
DCLRE1AQ6PJP8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.13■■■□□ 2.09
DCLRE1AQ6PJP8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
DCLRE1AQ6PJP8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
DCLRE1AQ6PJP8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
DCLRE1AQ6PJP8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
DCLRE1AQ6PJP8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.11■■■□□ 2.09
DCLRE1AQ6PJP8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.11■■■□□ 2.09
DCLRE1AQ6PJP8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.11■■■□□ 2.09
DCLRE1AQ6PJP8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
DCLRE1AQ6PJP8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
DCLRE1AQ6PJP8 MIR639-201ENST00000384974 98 ntBASIC28.1■■■□□ 2.09
DCLRE1AQ6PJP8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.1■■■□□ 2.09
DCLRE1AQ6PJP8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
DCLRE1AQ6PJP8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
DCLRE1AQ6PJP8 AC016575.1-201ENST00000607026 382 ntBASIC28.09■■■□□ 2.09
DCLRE1AQ6PJP8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.08■■■□□ 2.09
DCLRE1AQ6PJP8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
DCLRE1AQ6PJP8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
DCLRE1AQ6PJP8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
DCLRE1AQ6PJP8 CR559946.2-201ENST00000623684 991 ntBASIC28.06■■■□□ 2.08
DCLRE1AQ6PJP8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
DCLRE1AQ6PJP8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
DCLRE1AQ6PJP8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
DCLRE1AQ6PJP8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
DCLRE1AQ6PJP8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
DCLRE1AQ6PJP8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
DCLRE1AQ6PJP8 MIR4449-201ENST00000578365 66 ntBASIC28.04■■■□□ 2.08
DCLRE1AQ6PJP8 AL135925.1-201ENST00000605920 1701 ntBASIC28.04■■■□□ 2.08
DCLRE1AQ6PJP8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
DCLRE1AQ6PJP8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
DCLRE1AQ6PJP8 DUX4L13-201ENST00000554103 1267 ntBASIC28.02■■■□□ 2.08
DCLRE1AQ6PJP8 DUX4L15-201ENST00000611059 1267 ntBASIC28.02■■■□□ 2.08
DCLRE1AQ6PJP8 DUX4L23-201ENST00000615195 1269 ntBASIC28.02■■■□□ 2.08
DCLRE1AQ6PJP8 DUX4L24-201ENST00000617576 1269 ntBASIC28.02■■■□□ 2.08
DCLRE1AQ6PJP8 DUX4L22-201ENST00000618238 1269 ntBASIC28.02■■■□□ 2.08
DCLRE1AQ6PJP8 DUX4L20-201ENST00000619712 1269 ntBASIC28.02■■■□□ 2.08
DCLRE1AQ6PJP8 DUX4L21-201ENST00000622058 1269 ntBASIC28.02■■■□□ 2.08
DCLRE1AQ6PJP8 DUX4L10-201ENST00000622460 1267 ntBASIC28.02■■■□□ 2.08
DCLRE1AQ6PJP8 DUX4L25-201ENST00000624915 1269 ntBASIC28.02■■■□□ 2.08
DCLRE1AQ6PJP8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
DCLRE1AQ6PJP8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms