Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.97■■□□□ 1.43
RNFT1Q5M7Z0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNFT1Q5M7Z0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNFT1Q5M7Z0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNFT1Q5M7Z0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.95■■□□□ 1.42
RNFT1Q5M7Z0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.94■■□□□ 1.42
RNFT1Q5M7Z0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.93■■□□□ 1.42
RNFT1Q5M7Z0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNFT1Q5M7Z0 LINC01971-201ENST00000617888 1048 ntBASIC23.93■■□□□ 1.42
RNFT1Q5M7Z0 MIR3648-2-201ENST00000581792 180 ntBASIC23.92■■□□□ 1.42
RNFT1Q5M7Z0 DUX4L11-201ENST00000611504 1267 ntBASIC23.92■■□□□ 1.42
RNFT1Q5M7Z0 DUX4L12-201ENST00000614593 1267 ntBASIC23.92■■□□□ 1.42
RNFT1Q5M7Z0 MIR3648-1-201ENST00000615959 180 ntBASIC23.92■■□□□ 1.42
RNFT1Q5M7Z0 DUX4L14-201ENST00000621227 1267 ntBASIC23.92■■□□□ 1.42
RNFT1Q5M7Z0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNFT1Q5M7Z0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.91■■□□□ 1.42
RNFT1Q5M7Z0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNFT1Q5M7Z0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNFT1Q5M7Z0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.9■■□□□ 1.42
RNFT1Q5M7Z0 AC016575.1-201ENST00000607026 382 ntBASIC23.9■■□□□ 1.42
RNFT1Q5M7Z0 MIR639-201ENST00000384974 98 ntBASIC23.89■■□□□ 1.41
RNFT1Q5M7Z0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.89■■□□□ 1.41
RNFT1Q5M7Z0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNFT1Q5M7Z0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNFT1Q5M7Z0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNFT1Q5M7Z0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.88■■□□□ 1.41
RNFT1Q5M7Z0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.87■■□□□ 1.41
RNFT1Q5M7Z0 CR559946.2-201ENST00000623684 991 ntBASIC23.87■■□□□ 1.41
RNFT1Q5M7Z0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNFT1Q5M7Z0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNFT1Q5M7Z0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNFT1Q5M7Z0 MIR4449-201ENST00000578365 66 ntBASIC23.85■■□□□ 1.41
RNFT1Q5M7Z0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNFT1Q5M7Z0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.84■■□□□ 1.41
RNFT1Q5M7Z0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.84■■□□□ 1.41
RNFT1Q5M7Z0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNFT1Q5M7Z0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.84■■□□□ 1.41
RNFT1Q5M7Z0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.83■■□□□ 1.41
RNFT1Q5M7Z0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.83■■□□□ 1.41
RNFT1Q5M7Z0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.83■■□□□ 1.41
RNFT1Q5M7Z0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
RNFT1Q5M7Z0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RNFT1Q5M7Z0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RNFT1Q5M7Z0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
RNFT1Q5M7Z0 AC010864.1-201ENST00000609407 1511 ntBASIC23.8■■□□□ 1.4
RNFT1Q5M7Z0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.8■■□□□ 1.4
RNFT1Q5M7Z0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.8■■□□□ 1.4
RNFT1Q5M7Z0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNFT1Q5M7Z0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNFT1Q5M7Z0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNFT1Q5M7Z0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNFT1Q5M7Z0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RNFT1Q5M7Z0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNFT1Q5M7Z0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNFT1Q5M7Z0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RNFT1Q5M7Z0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNFT1Q5M7Z0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNFT1Q5M7Z0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RNFT1Q5M7Z0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNFT1Q5M7Z0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNFT1Q5M7Z0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.76■■□□□ 1.39
RNFT1Q5M7Z0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.76■■□□□ 1.39
RNFT1Q5M7Z0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNFT1Q5M7Z0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNFT1Q5M7Z0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNFT1Q5M7Z0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNFT1Q5M7Z0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
RNFT1Q5M7Z0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
RNFT1Q5M7Z0 DUX4L13-201ENST00000554103 1267 ntBASIC23.73■■□□□ 1.39
RNFT1Q5M7Z0 DUX4L15-201ENST00000611059 1267 ntBASIC23.73■■□□□ 1.39
RNFT1Q5M7Z0 DUX4L23-201ENST00000615195 1269 ntBASIC23.73■■□□□ 1.39
RNFT1Q5M7Z0 DUX4L24-201ENST00000617576 1269 ntBASIC23.73■■□□□ 1.39
RNFT1Q5M7Z0 DUX4L22-201ENST00000618238 1269 ntBASIC23.73■■□□□ 1.39
RNFT1Q5M7Z0 DUX4L20-201ENST00000619712 1269 ntBASIC23.73■■□□□ 1.39
RNFT1Q5M7Z0 DUX4L21-201ENST00000622058 1269 ntBASIC23.73■■□□□ 1.39
RNFT1Q5M7Z0 DUX4L10-201ENST00000622460 1267 ntBASIC23.73■■□□□ 1.39
RNFT1Q5M7Z0 DUX4L25-201ENST00000624915 1269 ntBASIC23.73■■□□□ 1.39
RNFT1Q5M7Z0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.73■■□□□ 1.39
RNFT1Q5M7Z0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNFT1Q5M7Z0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNFT1Q5M7Z0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNFT1Q5M7Z0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RNFT1Q5M7Z0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNFT1Q5M7Z0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNFT1Q5M7Z0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RNFT1Q5M7Z0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.7■■□□□ 1.38
RNFT1Q5M7Z0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.7■■□□□ 1.38
RNFT1Q5M7Z0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.7■■□□□ 1.38
RNFT1Q5M7Z0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNFT1Q5M7Z0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNFT1Q5M7Z0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNFT1Q5M7Z0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNFT1Q5M7Z0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
RNFT1Q5M7Z0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNFT1Q5M7Z0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNFT1Q5M7Z0 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.68■■□□□ 1.38
RNFT1Q5M7Z0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNFT1Q5M7Z0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.67■■□□□ 1.38
RNFT1Q5M7Z0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.67■■□□□ 1.38
RNFT1Q5M7Z0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms