Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
VMA21Q3ZAQ7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VMA21Q3ZAQ7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VMA21Q3ZAQ7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VMA21Q3ZAQ7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
VMA21Q3ZAQ7 CAHM-201ENST00000604200 896 ntBASIC21.11■□□□□ 0.97
VMA21Q3ZAQ7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
VMA21Q3ZAQ7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VMA21Q3ZAQ7 AC010864.1-201ENST00000609407 1511 ntBASIC21.1■□□□□ 0.97
VMA21Q3ZAQ7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VMA21Q3ZAQ7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VMA21Q3ZAQ7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VMA21Q3ZAQ7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
VMA21Q3ZAQ7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VMA21Q3ZAQ7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VMA21Q3ZAQ7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
VMA21Q3ZAQ7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
VMA21Q3ZAQ7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.09■□□□□ 0.97
VMA21Q3ZAQ7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.09■□□□□ 0.97
VMA21Q3ZAQ7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
VMA21Q3ZAQ7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.08■□□□□ 0.97
VMA21Q3ZAQ7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.08■□□□□ 0.97
VMA21Q3ZAQ7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
VMA21Q3ZAQ7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
VMA21Q3ZAQ7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.06■□□□□ 0.96
VMA21Q3ZAQ7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
VMA21Q3ZAQ7 AC139426.1-201ENST00000568218 2529 ntBASIC21.05■□□□□ 0.96
VMA21Q3ZAQ7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VMA21Q3ZAQ7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.05■□□□□ 0.96
VMA21Q3ZAQ7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.05■□□□□ 0.96
VMA21Q3ZAQ7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VMA21Q3ZAQ7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VMA21Q3ZAQ7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VMA21Q3ZAQ7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VMA21Q3ZAQ7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VMA21Q3ZAQ7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VMA21Q3ZAQ7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VMA21Q3ZAQ7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VMA21Q3ZAQ7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.02■□□□□ 0.96
VMA21Q3ZAQ7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.02■□□□□ 0.96
VMA21Q3ZAQ7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VMA21Q3ZAQ7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VMA21Q3ZAQ7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
VMA21Q3ZAQ7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
VMA21Q3ZAQ7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
VMA21Q3ZAQ7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.01■□□□□ 0.95
VMA21Q3ZAQ7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VMA21Q3ZAQ7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VMA21Q3ZAQ7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
VMA21Q3ZAQ7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21■□□□□ 0.95
VMA21Q3ZAQ7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VMA21Q3ZAQ7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VMA21Q3ZAQ7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
VMA21Q3ZAQ7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VMA21Q3ZAQ7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VMA21Q3ZAQ7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VMA21Q3ZAQ7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VMA21Q3ZAQ7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
VMA21Q3ZAQ7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VMA21Q3ZAQ7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VMA21Q3ZAQ7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
VMA21Q3ZAQ7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VMA21Q3ZAQ7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VMA21Q3ZAQ7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VMA21Q3ZAQ7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.95■□□□□ 0.94
VMA21Q3ZAQ7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.94■□□□□ 0.94
VMA21Q3ZAQ7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VMA21Q3ZAQ7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VMA21Q3ZAQ7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.94■□□□□ 0.94
VMA21Q3ZAQ7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
VMA21Q3ZAQ7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VMA21Q3ZAQ7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VMA21Q3ZAQ7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.93■□□□□ 0.94
VMA21Q3ZAQ7 AL139393.2-201ENST00000608721 2025 ntBASIC20.92■□□□□ 0.94
VMA21Q3ZAQ7 MIR762-201ENST00000390236 83 ntBASIC20.92■□□□□ 0.94
VMA21Q3ZAQ7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.92■□□□□ 0.94
VMA21Q3ZAQ7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VMA21Q3ZAQ7 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.91■□□□□ 0.94
VMA21Q3ZAQ7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.91■□□□□ 0.94
VMA21Q3ZAQ7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
VMA21Q3ZAQ7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VMA21Q3ZAQ7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
VMA21Q3ZAQ7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.9■□□□□ 0.94
VMA21Q3ZAQ7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
VMA21Q3ZAQ7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
VMA21Q3ZAQ7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.88■□□□□ 0.93
VMA21Q3ZAQ7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VMA21Q3ZAQ7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VMA21Q3ZAQ7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.88■□□□□ 0.93
VMA21Q3ZAQ7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VMA21Q3ZAQ7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.88■□□□□ 0.93
VMA21Q3ZAQ7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VMA21Q3ZAQ7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VMA21Q3ZAQ7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VMA21Q3ZAQ7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VMA21Q3ZAQ7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.87■□□□□ 0.93
VMA21Q3ZAQ7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
VMA21Q3ZAQ7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
VMA21Q3ZAQ7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.86■□□□□ 0.93
VMA21Q3ZAQ7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms