Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
ATP2B3Q16720 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
ATP2B3Q16720 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
ATP2B3Q16720 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC32.47■■■□□ 2.79
ATP2B3Q16720 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC32.47■■■□□ 2.79
ATP2B3Q16720 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
ATP2B3Q16720 ZNRF2P2-203ENST00000454624 420 ntBASIC32.47■■■□□ 2.79
ATP2B3Q16720 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
ATP2B3Q16720 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
ATP2B3Q16720 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
ATP2B3Q16720 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
ATP2B3Q16720 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
ATP2B3Q16720 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
ATP2B3Q16720 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
ATP2B3Q16720 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
ATP2B3Q16720 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.41■■■□□ 2.78
ATP2B3Q16720 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
ATP2B3Q16720 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
ATP2B3Q16720 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.4■■■□□ 2.78
ATP2B3Q16720 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.4■■■□□ 2.78
ATP2B3Q16720 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
ATP2B3Q16720 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32.38■■■□□ 2.77
ATP2B3Q16720 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.38■■■□□ 2.77
ATP2B3Q16720 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
ATP2B3Q16720 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
ATP2B3Q16720 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
ATP2B3Q16720 AC010864.1-201ENST00000609407 1511 ntBASIC32.36■■■□□ 2.77
ATP2B3Q16720 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.35■■■□□ 2.77
ATP2B3Q16720 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.35■■■□□ 2.77
ATP2B3Q16720 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.34■■■□□ 2.77
ATP2B3Q16720 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
ATP2B3Q16720 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
ATP2B3Q16720 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
ATP2B3Q16720 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
ATP2B3Q16720 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32.31■■■□□ 2.76
ATP2B3Q16720 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
ATP2B3Q16720 ST7-205ENST00000393446 2114 ntTSL 5 BASIC32.31■■■□□ 2.76
ATP2B3Q16720 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
ATP2B3Q16720 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.3■■■□□ 2.76
ATP2B3Q16720 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.3■■■□□ 2.76
ATP2B3Q16720 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
ATP2B3Q16720 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
ATP2B3Q16720 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
ATP2B3Q16720 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.28■■■□□ 2.76
ATP2B3Q16720 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
ATP2B3Q16720 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
ATP2B3Q16720 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
ATP2B3Q16720 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
ATP2B3Q16720 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
ATP2B3Q16720 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
ATP2B3Q16720 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.24■■■□□ 2.75
ATP2B3Q16720 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
ATP2B3Q16720 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.22■■■□□ 2.75
ATP2B3Q16720 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.22■■■□□ 2.75
ATP2B3Q16720 AL135925.1-201ENST00000605920 1701 ntBASIC32.22■■■□□ 2.75
ATP2B3Q16720 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
ATP2B3Q16720 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.21■■■□□ 2.75
ATP2B3Q16720 ST7-202ENST00000323984 2142 ntTSL 5 BASIC32.2■■■□□ 2.75
ATP2B3Q16720 ST7-207ENST00000393449 2127 ntTSL 5 BASIC32.2■■■□□ 2.75
ATP2B3Q16720 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC32.19■■■□□ 2.74
ATP2B3Q16720 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
ATP2B3Q16720 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.19■■■□□ 2.74
ATP2B3Q16720 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
ATP2B3Q16720 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
ATP2B3Q16720 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
ATP2B3Q16720 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
ATP2B3Q16720 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
ATP2B3Q16720 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
ATP2B3Q16720 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.14■■■□□ 2.74
ATP2B3Q16720 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC32.14■■■□□ 2.74
ATP2B3Q16720 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
ATP2B3Q16720 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
ATP2B3Q16720 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC32.13■■■□□ 2.73
ATP2B3Q16720 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
ATP2B3Q16720 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC32.12■■■□□ 2.73
ATP2B3Q16720 LINC01971-201ENST00000617888 1048 ntBASIC32.12■■■□□ 2.73
ATP2B3Q16720 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC32.11■■■□□ 2.73
ATP2B3Q16720 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ATP2B3Q16720 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.1■■■□□ 2.73
ATP2B3Q16720 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC32.09■■■□□ 2.73
ATP2B3Q16720 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ATP2B3Q16720 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ATP2B3Q16720 HLA-V-202ENST00000446817 847 ntBASIC32.08■■■□□ 2.73
ATP2B3Q16720 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC32.08■■■□□ 2.73
ATP2B3Q16720 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ATP2B3Q16720 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ATP2B3Q16720 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.07■■■□□ 2.72
ATP2B3Q16720 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.07■■■□□ 2.72
ATP2B3Q16720 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.07■■■□□ 2.72
ATP2B3Q16720 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.07■■■□□ 2.72
ATP2B3Q16720 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
ATP2B3Q16720 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
ATP2B3Q16720 DUX4L11-201ENST00000611504 1267 ntBASIC32.06■■■□□ 2.72
ATP2B3Q16720 DUX4L12-201ENST00000614593 1267 ntBASIC32.06■■■□□ 2.72
ATP2B3Q16720 DUX4L14-201ENST00000621227 1267 ntBASIC32.06■■■□□ 2.72
ATP2B3Q16720 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
ATP2B3Q16720 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
ATP2B3Q16720 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.03■■■□□ 2.72
ATP2B3Q16720 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
ATP2B3Q16720 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms