Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 NPP1YCR026C 2229 nt9.07□□□□□ -0.96
DDC1Q08949 SFP1YLR403W 2052 nt9.07□□□□□ -0.96
DDC1Q08949 CMP2YML057W 1815 nt9.07□□□□□ -0.96
DDC1Q08949 TVP23YDR084C 600 nt9.06□□□□□ -0.96
DDC1Q08949 AIM1YAL046C 357 nt9.06□□□□□ -0.96
DDC1Q08949 SPT20YOL148C 1815 nt9.05□□□□□ -0.96
DDC1Q08949 CDD1YLR245C 429 nt9.05□□□□□ -0.96
DDC1Q08949 YJR114WYJR114W 393 nt9.04□□□□□ -0.96
DDC1Q08949 ABZ2YMR289W 1125 nt9.04□□□□□ -0.96
DDC1Q08949 SAC7YDR389W 1965 nt9.04□□□□□ -0.96
DDC1Q08949 IGD1YFR017C 588 nt9.03□□□□□ -0.96
DDC1Q08949 OPI3YJR073C 621 nt9.03□□□□□ -0.96
DDC1Q08949 SLG1YOR008C 1137 nt9.02□□□□□ -0.97
DDC1Q08949 LSB6YJL100W 1824 nt9.02□□□□□ -0.97
DDC1Q08949 NAS2YIL007C 663 nt9.01□□□□□ -0.97
DDC1Q08949 BET2YPR176C 978 nt9.01□□□□□ -0.97
DDC1Q08949 ENT4YLL038C 744 nt9□□□□□ -0.97
DDC1Q08949 TIP1YBR067C 633 nt9□□□□□ -0.97
DDC1Q08949 TIM44YIL022W 1296 nt8.99□□□□□ -0.97
DDC1Q08949 BSP1YPR171W 1731 nt8.98□□□□□ -0.97
DDC1Q08949 DIG1YPL049C 1359 nt8.96□□□□□ -0.98
DDC1Q08949 THP3YPR045C 1413 nt8.95□□□□□ -0.98
DDC1Q08949 ESBP6YNL125C 2022 nt8.94□□□□□ -0.98
DDC1Q08949 YLR046CYLR046C 813 nt8.94□□□□□ -0.98
DDC1Q08949 KRE1YNL322C 942 nt8.94□□□□□ -0.98
DDC1Q08949 YNR064CYNR064C 873 nt8.94□□□□□ -0.98
DDC1Q08949 MUP1YGR055W 1725 nt8.94□□□□□ -0.98
DDC1Q08949 tA(AGC)DtA(AGC)D 73 nt8.93□□□□□ -0.98
DDC1Q08949 tA(AGC)FtA(AGC)F 73 nt8.93□□□□□ -0.98
DDC1Q08949 tA(AGC)GtA(AGC)G 73 nt8.93□□□□□ -0.98
DDC1Q08949 tA(AGC)HtA(AGC)H 73 nt8.93□□□□□ -0.98
DDC1Q08949 tA(AGC)JtA(AGC)J 73 nt8.93□□□□□ -0.98
DDC1Q08949 tA(AGC)K1tA(AGC)K1 73 nt8.93□□□□□ -0.98
DDC1Q08949 tA(AGC)K2tA(AGC)K2 73 nt8.93□□□□□ -0.98
DDC1Q08949 tA(AGC)LtA(AGC)L 73 nt8.93□□□□□ -0.98
DDC1Q08949 tA(AGC)M1tA(AGC)M1 73 nt8.93□□□□□ -0.98
DDC1Q08949 tA(AGC)M2tA(AGC)M2 73 nt8.93□□□□□ -0.98
DDC1Q08949 tA(AGC)PtA(AGC)P 73 nt8.93□□□□□ -0.98
DDC1Q08949 QDR2YIL121W 1629 nt8.92□□□□□ -0.98
DDC1Q08949 IPL1YPL209C 1104 nt8.92□□□□□ -0.98
DDC1Q08949 ARO8YGL202W 1503 nt8.91□□□□□ -0.98
DDC1Q08949 AMF1YOR378W 1548 nt8.91□□□□□ -0.98
DDC1Q08949 FSH2YMR222C 672 nt8.9□□□□□ -0.98
DDC1Q08949 SPE2YOL052C 1191 nt8.9□□□□□ -0.98
DDC1Q08949 ENO2YHR174W 1314 nt8.89□□□□□ -0.99
DDC1Q08949 PCP1YGR101W 1041 nt8.89□□□□□ -0.99
DDC1Q08949 TPC1YGR096W 945 nt8.88□□□□□ -0.99
DDC1Q08949 FLX1YIL134W 936 nt8.88□□□□□ -0.99
DDC1Q08949 DLD3YEL071W 1491 nt8.88□□□□□ -0.99
DDC1Q08949 HOL1YNR055C 1761 nt8.87□□□□□ -0.99
DDC1Q08949 PHB2YGR231C 933 nt8.87□□□□□ -0.99
DDC1Q08949 ITR2YOL103W 1830 nt8.87□□□□□ -0.99
DDC1Q08949 ELO1YJL196C 933 nt8.86□□□□□ -0.99
DDC1Q08949 COQ8YGL119W 1506 nt8.85□□□□□ -0.99
DDC1Q08949 KES1YPL145C 1305 nt8.85□□□□□ -0.99
DDC1Q08949 YCP4YCR004C 744 nt8.85□□□□□ -0.99
DDC1Q08949 YCR025CYCR025C 411 nt8.85□□□□□ -0.99
DDC1Q08949 ADH3YMR083W 1128 nt8.85□□□□□ -0.99
DDC1Q08949 SWT21YNL187W 1074 nt8.85□□□□□ -0.99
DDC1Q08949 ILV2YMR108W 2064 nt8.84□□□□□ -0.99
DDC1Q08949 SFL1YOR140W 2301 nt8.84□□□□□ -0.99
DDC1Q08949 KEL3YPL263C 1956 nt8.84□□□□□ -0.99
DDC1Q08949 LEU2YCL018W 1095 nt8.83□□□□□ -1
DDC1Q08949 DTR1YBR180W 1719 nt8.82□□□□□ -1
DDC1Q08949 YHR219WYHR219W 1875 nt8.81□□□□□ -1
DDC1Q08949 GID8YMR135C 1368 nt8.81□□□□□ -1
DDC1Q08949 SAM50YNL026W 1455 nt8.81□□□□□ -1
DDC1Q08949 SUV3YPL029W 2214 nt8.81□□□□□ -1
DDC1Q08949 SGA1YIL099W 1650 nt8.81□□□□□ -1
DDC1Q08949 ZAP1YJL056C 2643 nt8.81□□□□□ -1
DDC1Q08949 ACO2YJL200C 2370 nt8.8□□□□□ -1
DDC1Q08949 NAM8YHR086W 1572 nt8.8□□□□□ -1
DDC1Q08949 SWM1YDR260C 513 nt8.79□□□□□ -1
DDC1Q08949 YIA6YIL006W 1122 nt8.79□□□□□ -1
DDC1Q08949 RIB1YBL033C 1038 nt8.79□□□□□ -1
DDC1Q08949 YMR265CYMR265C 1386 nt8.78□□□□□ -1
DDC1Q08949 LYS20YDL182W 1287 nt8.78□□□□□ -1
DDC1Q08949 MOB1YIL106W 945 nt8.78□□□□□ -1
DDC1Q08949 MET1YKR069W 1782 nt8.78□□□□□ -1
DDC1Q08949 MRS6YOR370C 1812 nt8.77□□□□□ -1
DDC1Q08949 YKR012CYKR012C 378 nt8.77□□□□□ -1.01
DDC1Q08949 HAP5YOR358W 729 nt8.77□□□□□ -1.01
DDC1Q08949 VMA11YPL234C 495 nt8.77□□□□□ -1.01
DDC1Q08949 LSR1LSR1 1175 nt8.76□□□□□ -1.01
DDC1Q08949 SDS24YBR214W 1584 nt8.76□□□□□ -1.01
DDC1Q08949 YKL133CYKL133C 1392 nt8.75□□□□□ -1.01
DDC1Q08949 CYC3YAL039C 810 nt8.75□□□□□ -1.01
DDC1Q08949 snR31snR31 225 nt8.75□□□□□ -1.01
DDC1Q08949 TPO4YOR273C 1980 nt8.75□□□□□ -1.01
DDC1Q08949 SER2YGR208W 930 nt8.74□□□□□ -1.01
DDC1Q08949 SOD2YHR008C 702 nt8.73□□□□□ -1.01
DDC1Q08949 REX2YLR059C 810 nt8.73□□□□□ -1.01
DDC1Q08949 ERG6YML008C 1152 nt8.73□□□□□ -1.01
DDC1Q08949 CRC1YOR100C 984 nt8.73□□□□□ -1.01
DDC1Q08949 RPN14YGL004C 1254 nt8.72□□□□□ -1.01
DDC1Q08949 YKL053WYKL053W 375 nt8.72□□□□□ -1.01
DDC1Q08949 HMG2YLR450W 3138 nt8.72□□□□□ -1.01
DDC1Q08949 SRP102YKL154W 735 nt8.71□□□□□ -1.02
DDC1Q08949 VBA3YCL069W 1377 nt8.71□□□□□ -1.02
DDC1Q08949 UGP1YKL035W 1500 nt8.7□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 36.1 ms