Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.693e-6■■■□□ 16.7
HNRNPUQ00839 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC10.43□□□□□ -0.743e-6■■■□□ 16.7
HNRNPUQ00839 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC9.38□□□□□ -0.913e-6■■■□□ 16.7
HNRNPUQ00839 MAP4K4-207ENST00000417294 4251 ntTSL 58.7□□□□□ -1.023e-6■■■□□ 16.7
HNRNPUQ00839 AC002480.4-201ENST00000414116 2592 ntTSL 1 (best) BASIC12.45□□□□□ -0.427e-6■■■□□ 16.7
HNRNPUQ00839 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.434e-6■■■□□ 16.7
HNRNPUQ00839 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.644e-6■■■□□ 16.7
HNRNPUQ00839 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC21.32■■□□□ 12e-6■■■□□ 16.6
HNRNPUQ00839 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.92e-6■■■□□ 16.6
HNRNPUQ00839 PNPLA3-202ENST00000406117 1480 ntTSL 219.45■□□□□ 0.72e-6■■■□□ 16.6
HNRNPUQ00839 PNPLA3-205ENST00000497129 422 ntTSL 515.09■□□□□ 0.012e-6■■■□□ 16.6
HNRNPUQ00839 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC21.76■■□□□ 1.071e-6■■■□□ 16.5
HNRNPUQ00839 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC21.13■□□□□ 0.972e-6■■■□□ 16.5
HNRNPUQ00839 HPN-207ENST00000599363 1828 ntTSL 529.48■■■□□ 2.313e-6■■■□□ 16.5
HNRNPUQ00839 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.333e-6■■■□□ 16.5
HNRNPUQ00839 HPN-208ENST00000600390 564 ntTSL 423.37■■□□□ 1.333e-6■■■□□ 16.5
HNRNPUQ00839 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.183e-6■■■□□ 16.5
HNRNPUQ00839 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.4■□□□□ 0.543e-6■■■□□ 16.5
HNRNPUQ00839 AC007608.4-201ENST00000623140 3365 ntBASIC16.85■□□□□ 0.291e-8■■■□□ 16.4
HNRNPUQ00839 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC34.07■■■■□ 3.042e-10■■■□□ 16.4
HNRNPUQ00839 LRMDA-209ENST00000593699 1124 ntTSL 1 (best)13.68□□□□□ -0.223e-6■■■□□ 16.3
HNRNPUQ00839 LRMDA-210ENST00000593817 221 ntTSL 36.41□□□□□ -1.383e-6■■■□□ 16.3
HNRNPUQ00839 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC29.65■■■□□ 2.342e-6■■■□□ 16.1
HNRNPUQ00839 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.852e-6■■■□□ 16.1
HNRNPUQ00839 NR5A1-201ENST00000373587 768 ntTSL 326.48■■□□□ 1.832e-6■■■□□ 16.1
HNRNPUQ00839 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC23.13■■□□□ 1.293e-6■■■□□ 16.1
HNRNPUQ00839 EVA1A-211ENST00000490746 589 ntTSL 522.19■■□□□ 1.143e-6■■■□□ 16.1
HNRNPUQ00839 EVA1A-206ENST00000432649 569 ntAPPRIS ALT2 TSL 320.86■□□□□ 0.933e-6■■■□□ 16.1
HNRNPUQ00839 EVA1A-208ENST00000485891 479 ntTSL 520.46■□□□□ 0.873e-6■■■□□ 16.1
HNRNPUQ00839 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.693e-6■■■□□ 16.1
HNRNPUQ00839 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.383e-6■■■□□ 16.1
HNRNPUQ00839 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.193e-6■■■□□ 16.1
HNRNPUQ00839 EVA1A-210ENST00000486696 585 ntTSL 39.32□□□□□ -0.923e-6■■■□□ 16.1
HNRNPUQ00839 MEG3-222ENST00000524035 2853 ntTSL 223.66■■□□□ 1.381e-8■■■□□ 16.1
HNRNPUQ00839 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.794e-9■■■□□ 16.1
HNRNPUQ00839 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC19.79■□□□□ 0.764e-9■■■□□ 16.1
HNRNPUQ00839 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC19.5■□□□□ 0.714e-9■■■□□ 16.1
HNRNPUQ00839 ABAT-212ENST00000566590 2423 ntTSL 1 (best)19.2■□□□□ 0.664e-9■■■□□ 16.1
HNRNPUQ00839 ABAT-202ENST00000396600 5586 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.244e-9■■■□□ 16.1
HNRNPUQ00839 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.86e-10■■■□□ 15.9
HNRNPUQ00839 SMYD3-207ENST00000462422 971 ntTSL 516.46■□□□□ 0.236e-10■■■□□ 15.9
HNRNPUQ00839 SMYD3-203ENST00000391836 732 ntTSL 513.66□□□□□ -0.226e-10■■■□□ 15.9
HNRNPUQ00839 SMYD3-216ENST00000492487 634 ntTSL 310.79□□□□□ -0.686e-10■■■□□ 15.9
HNRNPUQ00839 SMYD3-208ENST00000464398 540 ntTSL 310.67□□□□□ -0.76e-10■■■□□ 15.9
HNRNPUQ00839 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC9.19□□□□□ -0.946e-10■■■□□ 15.9
HNRNPUQ00839 SMYD3-205ENST00000453676 562 ntTSL 45.92□□□□□ -1.466e-10■■■□□ 15.9
HNRNPUQ00839 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.39□□□□□ -1.391e-6■■■□□ 15.9
HNRNPUQ00839 CTIF-206ENST00000588345 584 ntTSL 322.59■■□□□ 1.215e-6■■■□□ 15.8
HNRNPUQ00839 CTIF-209ENST00000591387 859 ntTSL 222.49■■□□□ 1.195e-6■■■□□ 15.8
HNRNPUQ00839 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.15e-6■■■□□ 15.8
HNRNPUQ00839 CTIF-203ENST00000587752 683 ntTSL 518.86■□□□□ 0.615e-6■■■□□ 15.8
HNRNPUQ00839 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC17.67■□□□□ 0.425e-6■■■□□ 15.8
HNRNPUQ00839 CTIF-210ENST00000591412 491 ntTSL 316.57■□□□□ 0.245e-6■■■□□ 15.8
HNRNPUQ00839 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC34.47■■■■□ 3.115e-6■■■□□ 15.8
HNRNPUQ00839 RALY-206ENST00000448364 1204 ntTSL 230.61■■■□□ 2.495e-6■■■□□ 15.8
HNRNPUQ00839 RALY-202ENST00000333552 786 ntTSL 328.12■■■□□ 2.095e-6■■■□□ 15.8
HNRNPUQ00839 RALY-204ENST00000413297 766 ntTSL 525.87■■□□□ 1.735e-6■■■□□ 15.8
HNRNPUQ00839 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.575e-6■■■□□ 15.8
HNRNPUQ00839 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■■ 41e-8■■■□□ 15.8
HNRNPUQ00839 GPI-208ENST00000588991 2021 ntTSL 228.21■■■□□ 2.111e-8■■■□□ 15.8
HNRNPUQ00839 GPI-205ENST00000586425 1799 ntTSL 5 BASIC21.18■□□□□ 0.981e-8■■■□□ 15.8
HNRNPUQ00839 GPI-202ENST00000415930 4000 ntTSL 2 BASIC10.97□□□□□ -0.651e-8■■■□□ 15.8
HNRNPUQ00839 DLGAP4-209ENST00000479220 577 ntTSL 316.47■□□□□ 0.233e-6■■■□□ 15.6
HNRNPUQ00839 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.997e-7■■■□□ 15.5
HNRNPUQ00839 TAF4-207ENST00000608887 284 ntTSL 410.2□□□□□ -0.787e-7■■■□□ 15.5
HNRNPUQ00839 ACTN4-207ENST00000495553 586 ntTSL 512.49□□□□□ -0.412e-6■■■□□ 15.5
HNRNPUQ00839 PAH-215ENST00000553106 4122 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.141e-6■■■□□ 15.4
HNRNPUQ00839 PAH-201ENST00000307000 2466 ntTSL 5 BASIC10.14□□□□□ -0.791e-6■■■□□ 15.4
HNRNPUQ00839 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.891e-6■■■□□ 15.4
HNRNPUQ00839 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC23.8■■□□□ 1.41e-6■■■□□ 15.4
HNRNPUQ00839 KMT5C-203ENST00000445196 2077 ntTSL 523.09■■□□□ 1.291e-6■■■□□ 15.4
HNRNPUQ00839 KMT5C-211ENST00000592631 869 ntTSL 322.68■■□□□ 1.221e-6■■■□□ 15.4
HNRNPUQ00839 KMT5C-204ENST00000460956 637 ntTSL 520.68■□□□□ 0.91e-6■■■□□ 15.4
HNRNPUQ00839 KMT5C-209ENST00000587442 464 ntTSL 314.53□□□□□ -0.081e-6■■■□□ 15.4
HNRNPUQ00839 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.651e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.84■■□□□ 1.894e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-215ENST00000626462 587 ntTSL 424.52■■□□□ 1.524e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-213ENST00000626294 593 ntTSL 1 (best)24.47■■□□□ 1.514e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.264e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.144e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-218ENST00000628630 556 ntTSL 421.92■■□□□ 1.14e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-219ENST00000628651 563 ntTSL 421.92■■□□□ 1.14e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC21.73■■□□□ 1.074e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-216ENST00000627449 588 ntTSL 421.38■■□□□ 1.014e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.844e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.44e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-217ENST00000628069 559 ntTSL 415.42■□□□□ 0.064e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-204ENST00000367572 2496 ntTSL 1 (best) BASIC14.52□□□□□ -0.084e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-203ENST00000367571 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.264e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-220ENST00000629195 723 ntTSL 1 (best)12.65□□□□□ -0.384e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-214ENST00000626373 333 ntTSL 1 (best)11.63□□□□□ -0.554e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC11.56□□□□□ -0.564e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.594e-6■■■□□ 15.3
HNRNPUQ00839 PLAGL1-212ENST00000626022 559 ntTSL 49.32□□□□□ -0.924e-6■■■□□ 15.3
HNRNPUQ00839 NOTUM-202ENST00000425009 996 ntTSL 330.44■■■□□ 2.461e-8■■■□□ 15.2
HNRNPUQ00839 NOTUM-203ENST00000477214 813 ntTSL 530.1■■■□□ 2.411e-8■■■□□ 15.2
HNRNPUQ00839 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.391e-8■■■□□ 15.2
HNRNPUQ00839 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.972e-6■■■□□ 15.2
HNRNPUQ00839 DGAT1-207ENST00000531896 981 ntTSL 332.06■■■□□ 2.726e-6■■■□□ 15.1
HNRNPUQ00839 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC31.71■■■□□ 2.676e-6■■■□□ 15.1
Retrieved 100 of 2,288 protein–RNA pairs in 15.4 ms