Protein–RNA interactions for Protein: P80188

LCN2, Neutrophil gelatinase-associated lipocalin, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2P80188 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LCN2P80188 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.97■■□□□ 1.11
LCN2P80188 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LCN2P80188 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
LCN2P80188 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.95■■□□□ 1.1
LCN2P80188 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
LCN2P80188 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCN2P80188 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCN2P80188 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCN2P80188 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.94■■□□□ 1.1
LCN2P80188 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LCN2P80188 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LCN2P80188 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN2P80188 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
LCN2P80188 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN2P80188 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
LCN2P80188 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LCN2P80188 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
LCN2P80188 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LCN2P80188 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.91■■□□□ 1.1
LCN2P80188 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LCN2P80188 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.91■■□□□ 1.1
LCN2P80188 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
LCN2P80188 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LCN2P80188 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
LCN2P80188 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.91■■□□□ 1.1
LCN2P80188 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
LCN2P80188 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.9■■□□□ 1.1
LCN2P80188 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LCN2P80188 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LCN2P80188 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LCN2P80188 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LCN2P80188 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LCN2P80188 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
LCN2P80188 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LCN2P80188 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LCN2P80188 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LCN2P80188 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LCN2P80188 HLA-V-202ENST00000446817 847 ntBASIC21.88■■□□□ 1.09
LCN2P80188 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LCN2P80188 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LCN2P80188 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LCN2P80188 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.87■■□□□ 1.09
LCN2P80188 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LCN2P80188 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LCN2P80188 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LCN2P80188 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LCN2P80188 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
LCN2P80188 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
LCN2P80188 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.85■■□□□ 1.09
LCN2P80188 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LCN2P80188 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LCN2P80188 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCN2P80188 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCN2P80188 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LCN2P80188 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LCN2P80188 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
LCN2P80188 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.83■■□□□ 1.09
LCN2P80188 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LCN2P80188 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LCN2P80188 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LCN2P80188 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LCN2P80188 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.81■■□□□ 1.08
LCN2P80188 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.8■■□□□ 1.08
LCN2P80188 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.79■■□□□ 1.08
LCN2P80188 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LCN2P80188 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
LCN2P80188 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LCN2P80188 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LCN2P80188 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LCN2P80188 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCN2P80188 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.76■■□□□ 1.07
LCN2P80188 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LCN2P80188 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.75■■□□□ 1.07
LCN2P80188 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LCN2P80188 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
LCN2P80188 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCN2P80188 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCN2P80188 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.74■■□□□ 1.07
LCN2P80188 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCN2P80188 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.73■■□□□ 1.07
LCN2P80188 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCN2P80188 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.72■■□□□ 1.07
LCN2P80188 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCN2P80188 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LCN2P80188 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.71■■□□□ 1.07
LCN2P80188 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LCN2P80188 LINC01971-201ENST00000617888 1048 ntBASIC21.71■■□□□ 1.07
LCN2P80188 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.71■■□□□ 1.07
LCN2P80188 AC010864.1-201ENST00000609407 1511 ntBASIC21.7■■□□□ 1.07
LCN2P80188 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
LCN2P80188 DUX4L11-201ENST00000611504 1267 ntBASIC21.7■■□□□ 1.06
LCN2P80188 DUX4L12-201ENST00000614593 1267 ntBASIC21.7■■□□□ 1.06
LCN2P80188 DUX4L14-201ENST00000621227 1267 ntBASIC21.7■■□□□ 1.06
LCN2P80188 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LCN2P80188 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LCN2P80188 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LCN2P80188 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.68■■□□□ 1.06
LCN2P80188 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.68■■□□□ 1.06
LCN2P80188 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms