Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
WNT3AP56704 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
WNT3AP56704 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
WNT3AP56704 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
WNT3AP56704 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.63■■□□□ 1.85
WNT3AP56704 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.63■■□□□ 1.85
WNT3AP56704 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
WNT3AP56704 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
WNT3AP56704 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.62■■□□□ 1.85
WNT3AP56704 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
WNT3AP56704 AC005559.1-201ENST00000589661 871 ntBASIC26.61■■□□□ 1.85
WNT3AP56704 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
WNT3AP56704 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
WNT3AP56704 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
WNT3AP56704 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
WNT3AP56704 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.6■■□□□ 1.85
WNT3AP56704 ABCB10P3-201ENST00000561950 2166 ntBASIC26.6■■□□□ 1.85
WNT3AP56704 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
WNT3AP56704 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
WNT3AP56704 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
WNT3AP56704 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
WNT3AP56704 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
WNT3AP56704 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
WNT3AP56704 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
WNT3AP56704 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
WNT3AP56704 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
WNT3AP56704 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.54■■□□□ 1.84
WNT3AP56704 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
WNT3AP56704 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
WNT3AP56704 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.53■■□□□ 1.84
WNT3AP56704 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
WNT3AP56704 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
WNT3AP56704 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.52■■□□□ 1.84
WNT3AP56704 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.52■■□□□ 1.84
WNT3AP56704 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
WNT3AP56704 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
WNT3AP56704 DUX4L28-201ENST00000623687 678 ntBASIC26.52■■□□□ 1.84
WNT3AP56704 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
WNT3AP56704 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
WNT3AP56704 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
WNT3AP56704 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
WNT3AP56704 AC139426.1-201ENST00000568218 2529 ntBASIC26.5■■□□□ 1.83
WNT3AP56704 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
WNT3AP56704 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.5■■□□□ 1.83
WNT3AP56704 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
WNT3AP56704 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
WNT3AP56704 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.49■■□□□ 1.83
WNT3AP56704 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
WNT3AP56704 AP006261.1-201ENST00000584783 668 ntBASIC26.49■■□□□ 1.83
WNT3AP56704 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
WNT3AP56704 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
WNT3AP56704 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
WNT3AP56704 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.48■■□□□ 1.83
WNT3AP56704 MIR3665-201ENST00000578708 105 ntBASIC26.48■■□□□ 1.83
WNT3AP56704 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
WNT3AP56704 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
WNT3AP56704 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.47■■□□□ 1.83
WNT3AP56704 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
WNT3AP56704 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
WNT3AP56704 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
WNT3AP56704 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.46■■□□□ 1.83
WNT3AP56704 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.46■■□□□ 1.83
WNT3AP56704 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
WNT3AP56704 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
WNT3AP56704 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.45■■□□□ 1.82
WNT3AP56704 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
WNT3AP56704 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
WNT3AP56704 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
WNT3AP56704 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
WNT3AP56704 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.43■■□□□ 1.82
WNT3AP56704 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
WNT3AP56704 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
WNT3AP56704 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.42■■□□□ 1.82
WNT3AP56704 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.42■■□□□ 1.82
WNT3AP56704 AL162393.1-201ENST00000437852 946 ntBASIC26.41■■□□□ 1.82
WNT3AP56704 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
WNT3AP56704 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
WNT3AP56704 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
WNT3AP56704 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.41■■□□□ 1.82
WNT3AP56704 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.41■■□□□ 1.82
WNT3AP56704 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
WNT3AP56704 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.4■■□□□ 1.82
WNT3AP56704 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
WNT3AP56704 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
WNT3AP56704 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
WNT3AP56704 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.38■■□□□ 1.81
WNT3AP56704 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
WNT3AP56704 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
WNT3AP56704 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
WNT3AP56704 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
WNT3AP56704 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
WNT3AP56704 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
WNT3AP56704 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.37■■□□□ 1.81
WNT3AP56704 AL139393.2-201ENST00000608721 2025 ntBASIC26.37■■□□□ 1.81
WNT3AP56704 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.36■■□□□ 1.81
WNT3AP56704 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
WNT3AP56704 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
WNT3AP56704 AC087741.3-201ENST00000624270 1347 ntBASIC26.35■■□□□ 1.81
WNT3AP56704 AC127502.1-201ENST00000399971 1502 ntBASIC26.34■■□□□ 1.81
WNT3AP56704 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms