Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MIR762-201ENST00000390236 83 ntBASIC25.53■■□□□ 1.68
SLC6A12P48065 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
SLC6A12P48065 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
SLC6A12P48065 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SLC6A12P48065 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC6A12P48065 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC6A12P48065 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SLC6A12P48065 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.51■■□□□ 1.67
SLC6A12P48065 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
SLC6A12P48065 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
SLC6A12P48065 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLC6A12P48065 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLC6A12P48065 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLC6A12P48065 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SLC6A12P48065 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SLC6A12P48065 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC6A12P48065 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC6A12P48065 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC6A12P48065 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SLC6A12P48065 AC139426.1-201ENST00000568218 2529 ntBASIC25.49■■□□□ 1.67
SLC6A12P48065 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SLC6A12P48065 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SLC6A12P48065 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SLC6A12P48065 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.48■■□□□ 1.67
SLC6A12P48065 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.48■■□□□ 1.67
SLC6A12P48065 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.48■■□□□ 1.67
SLC6A12P48065 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SLC6A12P48065 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC6A12P48065 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC6A12P48065 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
SLC6A12P48065 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.46■■□□□ 1.67
SLC6A12P48065 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC6A12P48065 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC6A12P48065 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC6A12P48065 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
SLC6A12P48065 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
SLC6A12P48065 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.44■■□□□ 1.66
SLC6A12P48065 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SLC6A12P48065 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SLC6A12P48065 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.43■■□□□ 1.66
SLC6A12P48065 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.43■■□□□ 1.66
SLC6A12P48065 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
SLC6A12P48065 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SLC6A12P48065 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
SLC6A12P48065 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SLC6A12P48065 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SLC6A12P48065 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SLC6A12P48065 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SLC6A12P48065 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SLC6A12P48065 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SLC6A12P48065 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SLC6A12P48065 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SLC6A12P48065 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SLC6A12P48065 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SLC6A12P48065 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.38■■□□□ 1.65
SLC6A12P48065 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SLC6A12P48065 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
SLC6A12P48065 AL139393.2-201ENST00000608721 2025 ntBASIC25.37■■□□□ 1.65
SLC6A12P48065 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.37■■□□□ 1.65
SLC6A12P48065 AC005559.1-201ENST00000589661 871 ntBASIC25.36■■□□□ 1.65
SLC6A12P48065 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SLC6A12P48065 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC6A12P48065 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC6A12P48065 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SLC6A12P48065 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.35■■□□□ 1.65
SLC6A12P48065 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SLC6A12P48065 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.34■■□□□ 1.65
SLC6A12P48065 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
SLC6A12P48065 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SLC6A12P48065 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SLC6A12P48065 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.32■■□□□ 1.64
SLC6A12P48065 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.31■■□□□ 1.64
SLC6A12P48065 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.31■■□□□ 1.64
SLC6A12P48065 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC6A12P48065 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC6A12P48065 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.31■■□□□ 1.64
SLC6A12P48065 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.3■■□□□ 1.64
SLC6A12P48065 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SLC6A12P48065 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SLC6A12P48065 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SLC6A12P48065 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
SLC6A12P48065 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
SLC6A12P48065 DUX4L28-201ENST00000623687 678 ntBASIC25.29■■□□□ 1.64
SLC6A12P48065 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SLC6A12P48065 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.28■■□□□ 1.64
SLC6A12P48065 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.28■■□□□ 1.64
SLC6A12P48065 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.27■■□□□ 1.64
SLC6A12P48065 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SLC6A12P48065 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.27■■□□□ 1.64
SLC6A12P48065 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SLC6A12P48065 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.26■■□□□ 1.63
SLC6A12P48065 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.26■■□□□ 1.63
SLC6A12P48065 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.26■■□□□ 1.63
SLC6A12P48065 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.25■■□□□ 1.63
SLC6A12P48065 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SLC6A12P48065 AC127502.1-201ENST00000399971 1502 ntBASIC25.24■■□□□ 1.63
SLC6A12P48065 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.23■■□□□ 1.63
SLC6A12P48065 AP006261.1-201ENST00000584783 668 ntBASIC25.23■■□□□ 1.63
SLC6A12P48065 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SLC6A12P48065 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms