Protein–RNA interactions for Protein: P47142

VPS25, Vacuolar protein-sorting-associated protein 25, yeastyeast

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS25P47142 tA(AGC)DtA(AGC)D 73 nt9.02□□□□□ -0.97
VPS25P47142 tA(AGC)FtA(AGC)F 73 nt9.02□□□□□ -0.97
VPS25P47142 tA(AGC)GtA(AGC)G 73 nt9.02□□□□□ -0.97
VPS25P47142 tA(AGC)HtA(AGC)H 73 nt9.02□□□□□ -0.97
VPS25P47142 tA(AGC)JtA(AGC)J 73 nt9.02□□□□□ -0.97
VPS25P47142 tA(AGC)K1tA(AGC)K1 73 nt9.02□□□□□ -0.97
VPS25P47142 tA(AGC)K2tA(AGC)K2 73 nt9.02□□□□□ -0.97
VPS25P47142 tA(AGC)LtA(AGC)L 73 nt9.02□□□□□ -0.97
VPS25P47142 tA(AGC)M1tA(AGC)M1 73 nt9.02□□□□□ -0.97
VPS25P47142 tA(AGC)M2tA(AGC)M2 73 nt9.02□□□□□ -0.97
VPS25P47142 tA(AGC)PtA(AGC)P 73 nt9.02□□□□□ -0.97
VPS25P47142 ERG13YML126C 1476 nt9.02□□□□□ -0.97
VPS25P47142 SAM50YNL026W 1455 nt9.02□□□□□ -0.97
VPS25P47142 YAT1YAR035W 2064 nt9□□□□□ -0.97
VPS25P47142 SPE2YOL052C 1191 nt8.98□□□□□ -0.97
VPS25P47142 ENO2YHR174W 1314 nt8.97□□□□□ -0.97
VPS25P47142 NAS2YIL007C 663 nt8.96□□□□□ -0.98
VPS25P47142 THP3YPR045C 1413 nt8.96□□□□□ -0.98
VPS25P47142 INA1YLR413W 2028 nt8.95□□□□□ -0.98
VPS25P47142 YIL100C-AYIL100C-A 339 nt8.93□□□□□ -0.98
VPS25P47142 FLX1YIL134W 936 nt8.93□□□□□ -0.98
VPS25P47142 FSH2YMR222C 672 nt8.93□□□□□ -0.98
VPS25P47142 OPI3YJR073C 621 nt8.92□□□□□ -0.98
VPS25P47142 AIM1YAL046C 357 nt8.92□□□□□ -0.98
VPS25P47142 ENT4YLL038C 744 nt8.92□□□□□ -0.98
VPS25P47142 CDD1YLR245C 429 nt8.92□□□□□ -0.98
VPS25P47142 RDN25-1RDN25-1 3396 nt8.9□□□□□ -0.98
VPS25P47142 RDN25-2RDN25-2 3396 nt8.9□□□□□ -0.98
VPS25P47142 POP2YNR052C 1302 nt8.9□□□□□ -0.98
VPS25P47142 MOB1YIL106W 945 nt8.9□□□□□ -0.98
VPS25P47142 AMF1YOR378W 1548 nt8.9□□□□□ -0.99
VPS25P47142 TPC1YGR096W 945 nt8.89□□□□□ -0.99
VPS25P47142 LYS20YDL182W 1287 nt8.88□□□□□ -0.99
VPS25P47142 CYC3YAL039C 810 nt8.88□□□□□ -0.99
VPS25P47142 RCR1YBR005W 642 nt8.88□□□□□ -0.99
VPS25P47142 YMR007WYMR007W 381 nt8.87□□□□□ -0.99
VPS25P47142 ADH3YMR083W 1128 nt8.87□□□□□ -0.99
VPS25P47142 BET2YPR176C 978 nt8.87□□□□□ -0.99
VPS25P47142 QDR2YIL121W 1629 nt8.87□□□□□ -0.99
VPS25P47142 PHB2YGR231C 933 nt8.86□□□□□ -0.99
VPS25P47142 LEU2YCL018W 1095 nt8.86□□□□□ -0.99
VPS25P47142 LSB6YJL100W 1824 nt8.85□□□□□ -0.99
VPS25P47142 SWM1YDR260C 513 nt8.85□□□□□ -0.99
VPS25P47142 YER152W-AYER152W-A 567 nt8.85□□□□□ -0.99
VPS25P47142 CCT2YIL142W 1584 nt8.85□□□□□ -0.99
VPS25P47142 PCP1YGR101W 1041 nt8.84□□□□□ -0.99
VPS25P47142 SER2YGR208W 930 nt8.84□□□□□ -0.99
VPS25P47142 YKR012CYKR012C 378 nt8.84□□□□□ -0.99
VPS25P47142 YNR064CYNR064C 873 nt8.84□□□□□ -0.99
VPS25P47142 SAC7YDR389W 1965 nt8.84□□□□□ -0.99
VPS25P47142 YLR046CYLR046C 813 nt8.83□□□□□ -1
VPS25P47142 DIG1YPL049C 1359 nt8.83□□□□□ -1
VPS25P47142 HTS1YPR033C 1641 nt8.81□□□□□ -1
VPS25P47142 OPI10YOL032W 741 nt8.8□□□□□ -1
VPS25P47142 ILV3YJR016C 1758 nt8.8□□□□□ -1
VPS25P47142 RPC82YPR190C 1965 nt8.8□□□□□ -1
VPS25P47142 BUD20YLR074C 501 nt8.78□□□□□ -1
VPS25P47142 YOR325WYOR325W 474 nt8.78□□□□□ -1
VPS25P47142 ENO1YGR254W 1314 nt8.78□□□□□ -1
VPS25P47142 NAM8YHR086W 1572 nt8.78□□□□□ -1
VPS25P47142 KEL3YPL263C 1956 nt8.77□□□□□ -1
VPS25P47142 CMP2YML057W 1815 nt8.77□□□□□ -1.01
VPS25P47142 SDS24YBR214W 1584 nt8.74□□□□□ -1.01
VPS25P47142 ELO1YJL196C 933 nt8.74□□□□□ -1.01
VPS25P47142 SRP102YKL154W 735 nt8.74□□□□□ -1.01
VPS25P47142 HSL7YBR133C 2484 nt8.74□□□□□ -1.01
VPS25P47142 YLR280CYLR280C 351 nt8.73□□□□□ -1.01
VPS25P47142 YGR210CYGR210C 1236 nt8.72□□□□□ -1.01
VPS25P47142 snR31snR31 225 nt8.72□□□□□ -1.01
VPS25P47142 SPT20YOL148C 1815 nt8.7□□□□□ -1.02
VPS25P47142 ERO1YML130C 1692 nt8.7□□□□□ -1.02
VPS25P47142 SWT21YNL187W 1074 nt8.7□□□□□ -1.02
VPS25P47142 FCY1YPR062W 477 nt8.7□□□□□ -1.02
VPS25P47142 TGA1tA(UGC)A 73 nt8.69□□□□□ -1.02
VPS25P47142 tA(UGC)EtA(UGC)E 73 nt8.69□□□□□ -1.02
VPS25P47142 tA(UGC)GtA(UGC)G 73 nt8.69□□□□□ -1.02
VPS25P47142 tA(UGC)LtA(UGC)L 73 nt8.69□□□□□ -1.02
VPS25P47142 tA(UGC)OtA(UGC)O 73 nt8.69□□□□□ -1.02
VPS25P47142 REX2YLR059C 810 nt8.69□□□□□ -1.02
VPS25P47142 VBA3YCL069W 1377 nt8.68□□□□□ -1.02
VPS25P47142 RPN14YGL004C 1254 nt8.67□□□□□ -1.02
VPS25P47142 MUP1YGR055W 1725 nt8.66□□□□□ -1.02
VPS25P47142 MET1YKR069W 1782 nt8.66□□□□□ -1.02
VPS25P47142 SRP54YPR088C 1626 nt8.65□□□□□ -1.02
VPS25P47142 DLD3YEL071W 1491 nt8.65□□□□□ -1.02
VPS25P47142 YOR343CYOR343C 327 nt8.65□□□□□ -1.02
VPS25P47142 RIM2YBR192W 1134 nt8.65□□□□□ -1.02
VPS25P47142 ITR2YOL103W 1830 nt8.65□□□□□ -1.02
VPS25P47142 SFL1YOR140W 2301 nt8.64□□□□□ -1.03
VPS25P47142 HAP5YOR358W 729 nt8.64□□□□□ -1.03
VPS25P47142 HRA1HRA1 564 nt8.63□□□□□ -1.03
VPS25P47142 SUV3YPL029W 2214 nt8.62□□□□□ -1.03
VPS25P47142 YMR265CYMR265C 1386 nt8.62□□□□□ -1.03
VPS25P47142 YKL053WYKL053W 375 nt8.62□□□□□ -1.03
VPS25P47142 YPT11YNL304W 1254 nt8.62□□□□□ -1.03
VPS25P47142 PAU21YOR394W 495 nt8.62□□□□□ -1.03
VPS25P47142 YPL108WYPL108W 507 nt8.62□□□□□ -1.03
VPS25P47142 PAU22YPL282C 495 nt8.62□□□□□ -1.03
VPS25P47142 ARO8YGL202W 1503 nt8.61□□□□□ -1.03
VPS25P47142 RPL12BYDR418W 498 nt8.61□□□□□ -1.03
Retrieved 100 of 7,029 protein–RNA pairs in 9.1 ms