Protein–RNA interactions for Protein: P45978

SCD6, Protein SCD6, yeastyeast

Known RBP RIP-Chip data

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCD6P45978 ABZ2YMR289W 1125 nt9.35□□□□□ -0.91
SCD6P45978 IGD1YFR017C 588 nt9.32□□□□□ -0.92
SCD6P45978 TIM44YIL022W 1296 nt9.31□□□□□ -0.92
SCD6P45978 OPI3YJR073C 621 nt9.31□□□□□ -0.92
SCD6P45978 BET2YPR176C 978 nt9.31□□□□□ -0.92 RIP-Chip
SCD6P45978 DIG1YPL049C 1359 nt9.3□□□□□ -0.92 RIP-Chip
SCD6P45978 LSB6YJL100W 1824 nt9.28□□□□□ -0.92 RIP-Chip
SCD6P45978 SAC7YDR389W 1965 nt9.28□□□□□ -0.92
SCD6P45978 YLR046CYLR046C 813 nt9.28□□□□□ -0.92 RIP-Chip
SCD6P45978 KRE1YNL322C 942 nt9.28□□□□□ -0.92
SCD6P45978 SLG1YOR008C 1137 nt9.28□□□□□ -0.92
SCD6P45978 TIP1YBR067C 633 nt9.28□□□□□ -0.92
SCD6P45978 MUP1YGR055W 1725 nt9.26□□□□□ -0.93 RIP-Chip
SCD6P45978 NAS2YIL007C 663 nt9.26□□□□□ -0.93
SCD6P45978 CDD1YLR245C 429 nt9.25□□□□□ -0.93
SCD6P45978 CMP2YML057W 1815 nt9.25□□□□□ -0.93 RIP-Chip
SCD6P45978 QDR2YIL121W 1629 nt9.24□□□□□ -0.93
SCD6P45978 THP3YPR045C 1413 nt9.24□□□□□ -0.93 RIP-Chip
SCD6P45978 YNR064CYNR064C 873 nt9.24□□□□□ -0.93
SCD6P45978 ENO2YHR174W 1314 nt9.24□□□□□ -0.93
SCD6P45978 AMF1YOR378W 1548 nt9.23□□□□□ -0.93
SCD6P45978 FSH2YMR222C 672 nt9.23□□□□□ -0.93
SCD6P45978 tA(AGC)DtA(AGC)D 73 nt9.21□□□□□ -0.94
SCD6P45978 tA(AGC)FtA(AGC)F 73 nt9.21□□□□□ -0.94
SCD6P45978 tA(AGC)GtA(AGC)G 73 nt9.21□□□□□ -0.94
SCD6P45978 tA(AGC)HtA(AGC)H 73 nt9.21□□□□□ -0.94
SCD6P45978 tA(AGC)JtA(AGC)J 73 nt9.21□□□□□ -0.94
SCD6P45978 tA(AGC)K1tA(AGC)K1 73 nt9.21□□□□□ -0.94
SCD6P45978 tA(AGC)K2tA(AGC)K2 73 nt9.21□□□□□ -0.94
SCD6P45978 tA(AGC)LtA(AGC)L 73 nt9.21□□□□□ -0.94
SCD6P45978 tA(AGC)M1tA(AGC)M1 73 nt9.21□□□□□ -0.94
SCD6P45978 tA(AGC)M2tA(AGC)M2 73 nt9.21□□□□□ -0.94
SCD6P45978 tA(AGC)PtA(AGC)P 73 nt9.21□□□□□ -0.94
SCD6P45978 PCP1YGR101W 1041 nt9.21□□□□□ -0.94 RIP-Chip
SCD6P45978 SPE2YOL052C 1191 nt9.21□□□□□ -0.94
SCD6P45978 IPL1YPL209C 1104 nt9.21□□□□□ -0.94
SCD6P45978 ARO8YGL202W 1503 nt9.21□□□□□ -0.94 RIP-Chip
SCD6P45978 YCR025CYCR025C 411 nt9.18□□□□□ -0.94
SCD6P45978 DLD3YEL071W 1491 nt9.17□□□□□ -0.94 RIP-Chip
SCD6P45978 TPC1YGR096W 945 nt9.17□□□□□ -0.94
SCD6P45978 LEU2YCL018W 1095 nt9.17□□□□□ -0.94
SCD6P45978 KEL3YPL263C 1956 nt9.17□□□□□ -0.94
SCD6P45978 COQ8YGL119W 1506 nt9.16□□□□□ -0.94 RIP-Chip
SCD6P45978 KES1YPL145C 1305 nt9.16□□□□□ -0.94
SCD6P45978 YCP4YCR004C 744 nt9.16□□□□□ -0.94
SCD6P45978 FLX1YIL134W 936 nt9.15□□□□□ -0.94 RIP-Chip
SCD6P45978 ELO1YJL196C 933 nt9.15□□□□□ -0.94
SCD6P45978 ACO2YJL200C 2370 nt9.14□□□□□ -0.95
SCD6P45978 ITR2YOL103W 1830 nt9.14□□□□□ -0.95
SCD6P45978 HOL1YNR055C 1761 nt9.14□□□□□ -0.95
SCD6P45978 PHB2YGR231C 933 nt9.13□□□□□ -0.95 RIP-Chip
SCD6P45978 ADH3YMR083W 1128 nt9.13□□□□□ -0.95
SCD6P45978 SWT21YNL187W 1074 nt9.13□□□□□ -0.95
SCD6P45978 GID8YMR135C 1368 nt9.12□□□□□ -0.95 RIP-Chip
SCD6P45978 VMA11YPL234C 495 nt9.1□□□□□ -0.95
SCD6P45978 snR31snR31 225 nt9.1□□□□□ -0.95
SCD6P45978 SGA1YIL099W 1650 nt9.1□□□□□ -0.95
SCD6P45978 YIA6YIL006W 1122 nt9.09□□□□□ -0.95
SCD6P45978 RIB1YBL033C 1038 nt9.09□□□□□ -0.95
SCD6P45978 YMR265CYMR265C 1386 nt9.09□□□□□ -0.95
SCD6P45978 SAM50YNL026W 1455 nt9.08□□□□□ -0.96 RIP-Chip
SCD6P45978 NAM8YHR086W 1572 nt9.08□□□□□ -0.96
SCD6P45978 MOB1YIL106W 945 nt9.08□□□□□ -0.96
SCD6P45978 YKR012CYKR012C 378 nt9.08□□□□□ -0.96
SCD6P45978 HAP5YOR358W 729 nt9.08□□□□□ -0.96
SCD6P45978 SFL1YOR140W 2301 nt9.08□□□□□ -0.96 RIP-Chip
SCD6P45978 YHR219WYHR219W 1875 nt9.07□□□□□ -0.96
SCD6P45978 RPN14YGL004C 1254 nt9.07□□□□□ -0.96
SCD6P45978 CYC3YAL039C 810 nt9.07□□□□□ -0.96 RIP-Chip
SCD6P45978 SUV3YPL029W 2214 nt9.07□□□□□ -0.96
SCD6P45978 FRE6YLL051C 2139 nt9.05□□□□□ -0.96 RIP-Chip
SCD6P45978 MET1YKR069W 1782 nt9.05□□□□□ -0.96
SCD6P45978 YKL133CYKL133C 1392 nt9.05□□□□□ -0.96 RIP-Chip
SCD6P45978 SDS24YBR214W 1584 nt9.04□□□□□ -0.96
SCD6P45978 LYS20YDL182W 1287 nt9.04□□□□□ -0.96
SCD6P45978 SWM1YDR260C 513 nt9.04□□□□□ -0.96
SCD6P45978 REX2YLR059C 810 nt9.04□□□□□ -0.96
SCD6P45978 LSR1LSR1 1175 nt9.04□□□□□ -0.96
SCD6P45978 MRS6YOR370C 1812 nt9.03□□□□□ -0.96 RIP-Chip
SCD6P45978 SER2YGR208W 930 nt9.03□□□□□ -0.96
SCD6P45978 HIS2YFR025C 1008 nt9.02□□□□□ -0.97
SCD6P45978 SOD2YHR008C 702 nt9.02□□□□□ -0.97
SCD6P45978 ENO1YGR254W 1314 nt9.02□□□□□ -0.97
SCD6P45978 RPD3YNL330C 1302 nt9.02□□□□□ -0.97 RIP-Chip
SCD6P45978 ZAP1YJL056C 2643 nt9.01□□□□□ -0.97
SCD6P45978 CRC1YOR100C 984 nt9.01□□□□□ -0.97 RIP-Chip
SCD6P45978 SNX3YOR357C 489 nt9.01□□□□□ -0.97
SCD6P45978 YKL053WYKL053W 375 nt9□□□□□ -0.97
SCD6P45978 SRP102YKL154W 735 nt9□□□□□ -0.97
SCD6P45978 HTS1YPR033C 1641 nt9□□□□□ -0.97 RIP-Chip
SCD6P45978 SRP54YPR088C 1626 nt9□□□□□ -0.97
SCD6P45978 ERG6YML008C 1152 nt8.99□□□□□ -0.97
SCD6P45978 VBA3YCL069W 1377 nt8.99□□□□□ -0.97
SCD6P45978 UGP1YKL035W 1500 nt8.98□□□□□ -0.97
SCD6P45978 KRR1YCL059C 951 nt8.97□□□□□ -0.97
SCD6P45978 CWP2YKL096W-A 279 nt8.97□□□□□ -0.97
SCD6P45978 YMR007WYMR007W 381 nt8.97□□□□□ -0.97
SCD6P45978 SAN1YDR143C 1833 nt8.96□□□□□ -0.98
SCD6P45978 YPT11YNL304W 1254 nt8.95□□□□□ -0.98 RIP-Chip
SCD6P45978 YLR280CYLR280C 351 nt8.94□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 30.5 ms