Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 YJR114WYJR114W 393 nt7.95□□□□□ -1.14
CUP9P41817 ABZ2YMR289W 1125 nt7.95□□□□□ -1.14
CUP9P41817 HEL2YDR266C 1920 nt7.95□□□□□ -1.14
CUP9P41817 TVP23YDR084C 600 nt7.94□□□□□ -1.14
CUP9P41817 YIL100C-AYIL100C-A 339 nt7.94□□□□□ -1.14
CUP9P41817 YOR325WYOR325W 474 nt7.94□□□□□ -1.14
CUP9P41817 ERG13YML126C 1476 nt7.94□□□□□ -1.14
CUP9P41817 HOL1YNR055C 1761 nt7.93□□□□□ -1.14
CUP9P41817 KRE1YNL322C 942 nt7.93□□□□□ -1.14
CUP9P41817 IPL1YPL209C 1104 nt7.92□□□□□ -1.14
CUP9P41817 YCR025CYCR025C 411 nt7.91□□□□□ -1.14
CUP9P41817 tA(AGC)DtA(AGC)D 73 nt7.91□□□□□ -1.14
CUP9P41817 tA(AGC)FtA(AGC)F 73 nt7.91□□□□□ -1.14
CUP9P41817 tA(AGC)GtA(AGC)G 73 nt7.91□□□□□ -1.14
CUP9P41817 tA(AGC)HtA(AGC)H 73 nt7.91□□□□□ -1.14
CUP9P41817 tA(AGC)JtA(AGC)J 73 nt7.91□□□□□ -1.14
CUP9P41817 tA(AGC)K1tA(AGC)K1 73 nt7.91□□□□□ -1.14
CUP9P41817 tA(AGC)K2tA(AGC)K2 73 nt7.91□□□□□ -1.14
CUP9P41817 tA(AGC)LtA(AGC)L 73 nt7.91□□□□□ -1.14
CUP9P41817 tA(AGC)M1tA(AGC)M1 73 nt7.91□□□□□ -1.14
CUP9P41817 tA(AGC)M2tA(AGC)M2 73 nt7.91□□□□□ -1.14
CUP9P41817 tA(AGC)PtA(AGC)P 73 nt7.91□□□□□ -1.14
CUP9P41817 MUP1YGR055W 1725 nt7.9□□□□□ -1.14
CUP9P41817 SOD2YHR008C 702 nt7.9□□□□□ -1.14
CUP9P41817 CDD1YLR245C 429 nt7.9□□□□□ -1.14
CUP9P41817 THP3YPR045C 1413 nt7.89□□□□□ -1.15
CUP9P41817 NAS2YIL007C 663 nt7.89□□□□□ -1.15
CUP9P41817 ACO2YJL200C 2370 nt7.89□□□□□ -1.15
CUP9P41817 ERG6YML008C 1152 nt7.88□□□□□ -1.15
CUP9P41817 FSH2YMR222C 672 nt7.88□□□□□ -1.15
CUP9P41817 OPI10YOL032W 741 nt7.88□□□□□ -1.15
CUP9P41817 SAM50YNL026W 1455 nt7.87□□□□□ -1.15
CUP9P41817 MET2YNL277W 1461 nt7.87□□□□□ -1.15
CUP9P41817 OPI3YJR073C 621 nt7.87□□□□□ -1.15
CUP9P41817 ENT4YLL038C 744 nt7.86□□□□□ -1.15
CUP9P41817 CCT2YIL142W 1584 nt7.85□□□□□ -1.15
CUP9P41817 FLX1YIL134W 936 nt7.85□□□□□ -1.15
CUP9P41817 AIM1YAL046C 357 nt7.85□□□□□ -1.15
CUP9P41817 SPE2YOL052C 1191 nt7.84□□□□□ -1.15
CUP9P41817 ENO2YHR174W 1314 nt7.83□□□□□ -1.16
CUP9P41817 AMF1YOR378W 1548 nt7.83□□□□□ -1.16
CUP9P41817 LSB6YJL100W 1824 nt7.81□□□□□ -1.16
CUP9P41817 RIM8YGL045W 1629 nt7.81□□□□□ -1.16
CUP9P41817 SAC7YDR389W 1965 nt7.8□□□□□ -1.16
CUP9P41817 YGL114WYGL114W 2178 nt7.8□□□□□ -1.16
CUP9P41817 COQ8YGL119W 1506 nt7.8□□□□□ -1.16
CUP9P41817 ARO8YGL202W 1503 nt7.8□□□□□ -1.16
CUP9P41817 SWM1YDR260C 513 nt7.8□□□□□ -1.16
CUP9P41817 ADH3YMR083W 1128 nt7.8□□□□□ -1.16
CUP9P41817 POP2YNR052C 1302 nt7.79□□□□□ -1.16
CUP9P41817 LYS20YDL182W 1287 nt7.79□□□□□ -1.16
CUP9P41817 TPC1YGR096W 945 nt7.79□□□□□ -1.16
CUP9P41817 PCP1YGR101W 1041 nt7.79□□□□□ -1.16
CUP9P41817 PHB2YGR231C 933 nt7.79□□□□□ -1.16
CUP9P41817 YNR064CYNR064C 873 nt7.79□□□□□ -1.16
CUP9P41817 LEU2YCL018W 1095 nt7.78□□□□□ -1.16
CUP9P41817 MOB1YIL106W 945 nt7.77□□□□□ -1.17
CUP9P41817 CYC3YAL039C 810 nt7.77□□□□□ -1.17
CUP9P41817 YLR046CYLR046C 813 nt7.77□□□□□ -1.17
CUP9P41817 BET2YPR176C 978 nt7.77□□□□□ -1.17
CUP9P41817 DIG1YPL049C 1359 nt7.76□□□□□ -1.17
CUP9P41817 SER2YGR208W 930 nt7.76□□□□□ -1.17
CUP9P41817 YMR007WYMR007W 381 nt7.76□□□□□ -1.17
CUP9P41817 KES1YPL145C 1305 nt7.76□□□□□ -1.17
CUP9P41817 UGP1YKL035W 1500 nt7.75□□□□□ -1.17
CUP9P41817 RCR1YBR005W 642 nt7.75□□□□□ -1.17
CUP9P41817 QDR2YIL121W 1629 nt7.74□□□□□ -1.17
CUP9P41817 YER152W-AYER152W-A 567 nt7.74□□□□□ -1.17
CUP9P41817 SGA1YIL099W 1650 nt7.73□□□□□ -1.17
CUP9P41817 ZAP1YJL056C 2643 nt7.73□□□□□ -1.17
CUP9P41817 GID7YCL039W 2238 nt7.73□□□□□ -1.17
CUP9P41817 YKR012CYKR012C 378 nt7.73□□□□□ -1.17
CUP9P41817 HTS1YPR033C 1641 nt7.73□□□□□ -1.17
CUP9P41817 SFP1YLR403W 2052 nt7.72□□□□□ -1.17
CUP9P41817 KEL3YPL263C 1956 nt7.71□□□□□ -1.17
CUP9P41817 HIS2YFR025C 1008 nt7.7□□□□□ -1.18
CUP9P41817 SRP102YKL154W 735 nt7.7□□□□□ -1.18
CUP9P41817 NAM8YHR086W 1572 nt7.7□□□□□ -1.18
CUP9P41817 SDS24YBR214W 1584 nt7.7□□□□□ -1.18
CUP9P41817 SWT21YNL187W 1074 nt7.69□□□□□ -1.18
CUP9P41817 ENO1YGR254W 1314 nt7.69□□□□□ -1.18
CUP9P41817 ELO1YJL196C 933 nt7.68□□□□□ -1.18
CUP9P41817 snR31snR31 225 nt7.67□□□□□ -1.18
CUP9P41817 FRE6YLL051C 2139 nt7.66□□□□□ -1.18
CUP9P41817 NPP1YCR026C 2229 nt7.66□□□□□ -1.18
CUP9P41817 DLD3YEL071W 1491 nt7.66□□□□□ -1.18
CUP9P41817 REX2YLR059C 810 nt7.65□□□□□ -1.18
CUP9P41817 ERO1YML130C 1692 nt7.64□□□□□ -1.19
CUP9P41817 BUD20YLR074C 501 nt7.64□□□□□ -1.19
CUP9P41817 YLR280CYLR280C 351 nt7.64□□□□□ -1.19
CUP9P41817 ITR2YOL103W 1830 nt7.64□□□□□ -1.19
CUP9P41817 VBA3YCL069W 1377 nt7.63□□□□□ -1.19
CUP9P41817 GID8YMR135C 1368 nt7.63□□□□□ -1.19
CUP9P41817 RPN14YGL004C 1254 nt7.63□□□□□ -1.19
CUP9P41817 YGR210CYGR210C 1236 nt7.63□□□□□ -1.19
CUP9P41817 HAP5YOR358W 729 nt7.63□□□□□ -1.19
CUP9P41817 SFL1YOR140W 2301 nt7.63□□□□□ -1.19
CUP9P41817 YMR265CYMR265C 1386 nt7.62□□□□□ -1.19
CUP9P41817 MET1YKR069W 1782 nt7.61□□□□□ -1.19
CUP9P41817 YMR209CYMR209C 1374 nt7.61□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms