Protein–RNA interactions for Protein: P40016

RPN3, 26S proteasome regulatory subunit RPN3, yeastyeast

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN3P40016 PUP1YOR157C 786 nt9.62□□□□□ -0.87
RPN3P40016 ADE8YDR408C 645 nt9.61□□□□□ -0.87
RPN3P40016 AIM1YAL046C 357 nt9.59□□□□□ -0.87
RPN3P40016 TVP23YDR084C 600 nt9.58□□□□□ -0.88
RPN3P40016 PAU19YMR325W 375 nt9.58□□□□□ -0.88
RPN3P40016 YJR114WYJR114W 393 nt9.57□□□□□ -0.88
RPN3P40016 ENT4YLL038C 744 nt9.57□□□□□ -0.88
RPN3P40016 LSB6YJL100W 1824 nt9.54□□□□□ -0.88
RPN3P40016 ABZ2YMR289W 1125 nt9.54□□□□□ -0.88
RPN3P40016 BET2YPR176C 978 nt9.54□□□□□ -0.88
RPN3P40016 OPI3YJR073C 621 nt9.53□□□□□ -0.88
RPN3P40016 SAC7YDR389W 1965 nt9.53□□□□□ -0.88
RPN3P40016 CMP2YML057W 1815 nt9.52□□□□□ -0.89
RPN3P40016 MUP1YGR055W 1725 nt9.51□□□□□ -0.89
RPN3P40016 DIG1YPL049C 1359 nt9.5□□□□□ -0.89
RPN3P40016 IGD1YFR017C 588 nt9.49□□□□□ -0.89
RPN3P40016 YLR046CYLR046C 813 nt9.48□□□□□ -0.89
RPN3P40016 ARO8YGL202W 1503 nt9.46□□□□□ -0.89
RPN3P40016 QDR2YIL121W 1629 nt9.46□□□□□ -0.89
RPN3P40016 NAS2YIL007C 663 nt9.46□□□□□ -0.9
RPN3P40016 CDD1YLR245C 429 nt9.46□□□□□ -0.9
RPN3P40016 KRE1YNL322C 942 nt9.43□□□□□ -0.9
RPN3P40016 YNR064CYNR064C 873 nt9.43□□□□□ -0.9
RPN3P40016 SLG1YOR008C 1137 nt9.43□□□□□ -0.9
RPN3P40016 TIP1YBR067C 633 nt9.43□□□□□ -0.9
RPN3P40016 THP3YPR045C 1413 nt9.42□□□□□ -0.9
RPN3P40016 HOL1YNR055C 1761 nt9.42□□□□□ -0.9
RPN3P40016 AMF1YOR378W 1548 nt9.41□□□□□ -0.9
RPN3P40016 ENO2YHR174W 1314 nt9.41□□□□□ -0.9
RPN3P40016 TIM44YIL022W 1296 nt9.41□□□□□ -0.9
RPN3P40016 COQ8YGL119W 1506 nt9.41□□□□□ -0.9
RPN3P40016 YJR154WYJR154W 1041 nt9.4□□□□□ -0.9
RPN3P40016 DLD3YEL071W 1491 nt9.4□□□□□ -0.91
RPN3P40016 KES1YPL145C 1305 nt9.39□□□□□ -0.91
RPN3P40016 tA(AGC)DtA(AGC)D 73 nt9.39□□□□□ -0.91
RPN3P40016 tA(AGC)FtA(AGC)F 73 nt9.39□□□□□ -0.91
RPN3P40016 tA(AGC)GtA(AGC)G 73 nt9.39□□□□□ -0.91
RPN3P40016 tA(AGC)HtA(AGC)H 73 nt9.39□□□□□ -0.91
RPN3P40016 tA(AGC)JtA(AGC)J 73 nt9.39□□□□□ -0.91
RPN3P40016 tA(AGC)K1tA(AGC)K1 73 nt9.39□□□□□ -0.91
RPN3P40016 tA(AGC)K2tA(AGC)K2 73 nt9.39□□□□□ -0.91
RPN3P40016 tA(AGC)LtA(AGC)L 73 nt9.39□□□□□ -0.91
RPN3P40016 tA(AGC)M1tA(AGC)M1 73 nt9.39□□□□□ -0.91
RPN3P40016 tA(AGC)M2tA(AGC)M2 73 nt9.39□□□□□ -0.91
RPN3P40016 tA(AGC)PtA(AGC)P 73 nt9.39□□□□□ -0.91
RPN3P40016 PCP1YGR101W 1041 nt9.39□□□□□ -0.91
RPN3P40016 FSH2YMR222C 672 nt9.39□□□□□ -0.91
RPN3P40016 SPE2YOL052C 1191 nt9.39□□□□□ -0.91
RPN3P40016 IPL1YPL209C 1104 nt9.38□□□□□ -0.91
RPN3P40016 ITR2YOL103W 1830 nt9.38□□□□□ -0.91
RPN3P40016 YEL009C-AYEL009C-A 408 nt9.37□□□□□ -0.91
RPN3P40016 TPC1YGR096W 945 nt9.37□□□□□ -0.91
RPN3P40016 KEL3YPL263C 1956 nt9.36□□□□□ -0.91
RPN3P40016 ELO1YJL196C 933 nt9.36□□□□□ -0.91
RPN3P40016 GID8YMR135C 1368 nt9.36□□□□□ -0.91
RPN3P40016 LEU2YCL018W 1095 nt9.35□□□□□ -0.91
RPN3P40016 SGA1YIL099W 1650 nt9.35□□□□□ -0.91
RPN3P40016 REG2YBR050C 1017 nt9.34□□□□□ -0.91
RPN3P40016 SWT21YNL187W 1074 nt9.33□□□□□ -0.92
RPN3P40016 YHR219WYHR219W 1875 nt9.33□□□□□ -0.92
RPN3P40016 YCR025CYCR025C 411 nt9.32□□□□□ -0.92
RPN3P40016 PHB2YGR231C 933 nt9.32□□□□□ -0.92
RPN3P40016 FLX1YIL134W 936 nt9.32□□□□□ -0.92
RPN3P40016 SFL1YOR140W 2301 nt9.32□□□□□ -0.92
RPN3P40016 ADH3YMR083W 1128 nt9.31□□□□□ -0.92
RPN3P40016 ZAP1YJL056C 2643 nt9.3□□□□□ -0.92
RPN3P40016 SUV3YPL029W 2214 nt9.3□□□□□ -0.92
RPN3P40016 YMR265CYMR265C 1386 nt9.29□□□□□ -0.92
RPN3P40016 YCP4YCR004C 744 nt9.29□□□□□ -0.92
RPN3P40016 VMA11YPL234C 495 nt9.29□□□□□ -0.92
RPN3P40016 MRS6YOR370C 1812 nt9.28□□□□□ -0.92
RPN3P40016 YKL133CYKL133C 1392 nt9.28□□□□□ -0.92
RPN3P40016 HAP5YOR358W 729 nt9.28□□□□□ -0.92
RPN3P40016 NAM8YHR086W 1572 nt9.28□□□□□ -0.92
RPN3P40016 ACO2YJL200C 2370 nt9.27□□□□□ -0.93
RPN3P40016 LSR1LSR1 1175 nt9.27□□□□□ -0.93
RPN3P40016 snR31snR31 225 nt9.27□□□□□ -0.93
RPN3P40016 MET1YKR069W 1782 nt9.27□□□□□ -0.93
RPN3P40016 YKR012CYKR012C 378 nt9.26□□□□□ -0.93
RPN3P40016 RPN14YGL004C 1254 nt9.25□□□□□ -0.93
RPN3P40016 MOB1YIL106W 945 nt9.25□□□□□ -0.93
RPN3P40016 PAM17YKR065C 594 nt9.25□□□□□ -0.93
RPN3P40016 Q0010Q0010 387 nt9.25□□□□□ -0.93
RPN3P40016 SAM50YNL026W 1455 nt9.24□□□□□ -0.93
RPN3P40016 HIS2YFR025C 1008 nt9.24□□□□□ -0.93
RPN3P40016 UGP1YKL035W 1500 nt9.24□□□□□ -0.93
RPN3P40016 CYC3YAL039C 810 nt9.23□□□□□ -0.93
RPN3P40016 CRC1YOR100C 984 nt9.23□□□□□ -0.93
RPN3P40016 SDS24YBR214W 1584 nt9.23□□□□□ -0.93
RPN3P40016 RPD3YNL330C 1302 nt9.23□□□□□ -0.93
RPN3P40016 YKL053WYKL053W 375 nt9.22□□□□□ -0.93
RPN3P40016 SNX3YOR357C 489 nt9.22□□□□□ -0.93
RPN3P40016 LYS20YDL182W 1287 nt9.21□□□□□ -0.94
RPN3P40016 YIA6YIL006W 1122 nt9.21□□□□□ -0.94
RPN3P40016 REX2YLR059C 810 nt9.21□□□□□ -0.94
RPN3P40016 ARA2YMR041C 1008 nt9.21□□□□□ -0.94
RPN3P40016 SWM1YDR260C 513 nt9.2□□□□□ -0.94
RPN3P40016 RIB1YBL033C 1038 nt9.2□□□□□ -0.94
RPN3P40016 SER2YGR208W 930 nt9.19□□□□□ -0.94
RPN3P40016 VBA3YCL069W 1377 nt9.19□□□□□ -0.94
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms