Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.61■■■□□ 2.49
CTGFP29279 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CTGFP29279 RARRES2P2-201ENST00000394842 485 ntBASIC30.59■■■□□ 2.49
CTGFP29279 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.58■■■□□ 2.49
CTGFP29279 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CTGFP29279 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CTGFP29279 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.56■■■□□ 2.48
CTGFP29279 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CTGFP29279 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CTGFP29279 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CTGFP29279 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CTGFP29279 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CTGFP29279 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CTGFP29279 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.54■■■□□ 2.48
CTGFP29279 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.54■■■□□ 2.48
CTGFP29279 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CTGFP29279 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
CTGFP29279 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CTGFP29279 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
CTGFP29279 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
CTGFP29279 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.49■■■□□ 2.47
CTGFP29279 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CTGFP29279 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.49■■■□□ 2.47
CTGFP29279 ABHD17AP5-201ENST00000580133 923 ntBASIC30.49■■■□□ 2.47
CTGFP29279 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CTGFP29279 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CTGFP29279 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CTGFP29279 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CTGFP29279 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CTGFP29279 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CTGFP29279 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CTGFP29279 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CTGFP29279 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CTGFP29279 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CTGFP29279 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CTGFP29279 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CTGFP29279 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
CTGFP29279 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CTGFP29279 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.46■■■□□ 2.47
CTGFP29279 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
CTGFP29279 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CTGFP29279 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
CTGFP29279 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.44■■■□□ 2.46
CTGFP29279 GPX1-201ENST00000419349 1106 ntBASIC30.42■■■□□ 2.46
CTGFP29279 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CTGFP29279 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.4■■■□□ 2.46
CTGFP29279 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CTGFP29279 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
CTGFP29279 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.4■■■□□ 2.46
CTGFP29279 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CTGFP29279 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CTGFP29279 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CTGFP29279 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.37■■■□□ 2.45
CTGFP29279 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.37■■■□□ 2.45
CTGFP29279 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
CTGFP29279 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.36■■■□□ 2.45
CTGFP29279 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CTGFP29279 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.35■■■□□ 2.45
CTGFP29279 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.35■■■□□ 2.45
CTGFP29279 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CTGFP29279 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.34■■■□□ 2.45
CTGFP29279 RNF126P1-201ENST00000567452 1320 ntBASIC30.33■■■□□ 2.45
CTGFP29279 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CTGFP29279 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CTGFP29279 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
CTGFP29279 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.31■■■□□ 2.44
CTGFP29279 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CTGFP29279 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.3■■■□□ 2.44
CTGFP29279 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
CTGFP29279 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CTGFP29279 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CTGFP29279 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.29■■■□□ 2.44
CTGFP29279 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
CTGFP29279 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CTGFP29279 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.28■■■□□ 2.44
CTGFP29279 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.27■■■□□ 2.44
CTGFP29279 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CTGFP29279 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.23■■■□□ 2.43
CTGFP29279 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
CTGFP29279 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CTGFP29279 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.22■■■□□ 2.43
CTGFP29279 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CTGFP29279 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
CTGFP29279 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CTGFP29279 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CTGFP29279 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.21■■■□□ 2.43
CTGFP29279 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
CTGFP29279 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.2■■■□□ 2.43
CTGFP29279 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.19■■■□□ 2.42
CTGFP29279 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
CTGFP29279 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CTGFP29279 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CTGFP29279 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
CTGFP29279 NTF6A-201ENST00000591175 560 ntBASIC30.16■■■□□ 2.42
CTGFP29279 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CTGFP29279 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CTGFP29279 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.15■■■□□ 2.42
CTGFP29279 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CTGFP29279 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
CTGFP29279 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.14■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms