Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.79■■■□□ 2.52
NCLP19338 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
NCLP19338 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
NCLP19338 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
NCLP19338 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
NCLP19338 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
NCLP19338 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
NCLP19338 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
NCLP19338 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
NCLP19338 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
NCLP19338 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
NCLP19338 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.74■■■□□ 2.51
NCLP19338 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
NCLP19338 AL135925.1-201ENST00000605920 1701 ntBASIC30.73■■■□□ 2.51
NCLP19338 SETD8P1-201ENST00000623146 1180 ntBASIC30.73■■■□□ 2.51
NCLP19338 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
NCLP19338 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.72■■■□□ 2.51
NCLP19338 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NCLP19338 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
NCLP19338 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NCLP19338 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NCLP19338 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NCLP19338 AC097358.2-201ENST00000607541 1159 ntBASIC30.67■■■□□ 2.5
NCLP19338 AC142086.6-201ENST00000621154 1765 ntBASIC30.66■■■□□ 2.5
NCLP19338 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
NCLP19338 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
NCLP19338 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NCLP19338 AC136428.2-201ENST00000563187 214 ntBASIC30.64■■■□□ 2.5
NCLP19338 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.64■■■□□ 2.49
NCLP19338 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NCLP19338 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NCLP19338 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NCLP19338 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
NCLP19338 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.62■■■□□ 2.49
NCLP19338 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NCLP19338 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
NCLP19338 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.6■■■□□ 2.49
NCLP19338 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC30.6■■■□□ 2.49
NCLP19338 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NCLP19338 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.59■■■□□ 2.49
NCLP19338 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NCLP19338 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.59■■■□□ 2.49
NCLP19338 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.59■■■□□ 2.49
NCLP19338 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
NCLP19338 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.58■■■□□ 2.49
NCLP19338 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.57■■■□□ 2.48
NCLP19338 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.57■■■□□ 2.48
NCLP19338 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NCLP19338 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
NCLP19338 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
NCLP19338 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.56■■■□□ 2.48
NCLP19338 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
NCLP19338 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.55■■■□□ 2.48
NCLP19338 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NCLP19338 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
NCLP19338 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
NCLP19338 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
NCLP19338 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
NCLP19338 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
NCLP19338 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
NCLP19338 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.51■■■□□ 2.48
NCLP19338 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
NCLP19338 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
NCLP19338 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
NCLP19338 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
NCLP19338 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
NCLP19338 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
NCLP19338 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NCLP19338 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NCLP19338 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NCLP19338 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.48■■■□□ 2.47
NCLP19338 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
NCLP19338 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.47■■■□□ 2.47
NCLP19338 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.47■■■□□ 2.47
NCLP19338 WASH5P-204ENST00000632292 975 ntBASIC30.47■■■□□ 2.47
NCLP19338 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
NCLP19338 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.47■■■□□ 2.47
NCLP19338 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.46■■■□□ 2.47
NCLP19338 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
NCLP19338 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.45■■■□□ 2.46
NCLP19338 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
NCLP19338 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NCLP19338 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NCLP19338 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
NCLP19338 SUZ12P1-203ENST00000578195 985 ntBASIC30.42■■■□□ 2.46
NCLP19338 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.42■■■□□ 2.46
NCLP19338 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
NCLP19338 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
NCLP19338 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
NCLP19338 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NCLP19338 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
NCLP19338 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
NCLP19338 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NCLP19338 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NCLP19338 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
NCLP19338 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NCLP19338 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NCLP19338 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NCLP19338 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NCLP19338 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms