Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PSMC3P17980 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.49■■□□□ 1.99
PSMC3P17980 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
PSMC3P17980 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.48■■□□□ 1.99
PSMC3P17980 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.48■■□□□ 1.99
PSMC3P17980 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.48■■□□□ 1.99
PSMC3P17980 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PSMC3P17980 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PSMC3P17980 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PSMC3P17980 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PSMC3P17980 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.46■■□□□ 1.99
PSMC3P17980 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
PSMC3P17980 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
PSMC3P17980 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.45■■□□□ 1.98
PSMC3P17980 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
PSMC3P17980 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.45■■□□□ 1.98
PSMC3P17980 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.45■■□□□ 1.98
PSMC3P17980 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
PSMC3P17980 AC120057.4-201ENST00000624722 1615 ntBASIC27.44■■□□□ 1.98
PSMC3P17980 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PSMC3P17980 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PSMC3P17980 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PSMC3P17980 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
PSMC3P17980 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PSMC3P17980 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PSMC3P17980 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.41■■□□□ 1.98
PSMC3P17980 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
PSMC3P17980 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
PSMC3P17980 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PSMC3P17980 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
PSMC3P17980 HSD17B1P1-201ENST00000590052 955 ntBASIC27.39■■□□□ 1.98
PSMC3P17980 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PSMC3P17980 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.36■■□□□ 1.97
PSMC3P17980 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PSMC3P17980 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.35■■□□□ 1.97
PSMC3P17980 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PSMC3P17980 DUX4L13-201ENST00000554103 1267 ntBASIC27.35■■□□□ 1.97
PSMC3P17980 DUX4L15-201ENST00000611059 1267 ntBASIC27.35■■□□□ 1.97
PSMC3P17980 DUX4L23-201ENST00000615195 1269 ntBASIC27.35■■□□□ 1.97
PSMC3P17980 DUX4L24-201ENST00000617576 1269 ntBASIC27.35■■□□□ 1.97
PSMC3P17980 DUX4L22-201ENST00000618238 1269 ntBASIC27.35■■□□□ 1.97
PSMC3P17980 DUX4L20-201ENST00000619712 1269 ntBASIC27.35■■□□□ 1.97
PSMC3P17980 DUX4L21-201ENST00000622058 1269 ntBASIC27.35■■□□□ 1.97
PSMC3P17980 DUX4L10-201ENST00000622460 1267 ntBASIC27.35■■□□□ 1.97
PSMC3P17980 DUX4L25-201ENST00000624915 1269 ntBASIC27.35■■□□□ 1.97
PSMC3P17980 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
PSMC3P17980 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PSMC3P17980 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PSMC3P17980 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.34■■□□□ 1.97
PSMC3P17980 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
PSMC3P17980 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PSMC3P17980 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PSMC3P17980 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.31■■□□□ 1.96
PSMC3P17980 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
PSMC3P17980 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PSMC3P17980 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.3■■□□□ 1.96
PSMC3P17980 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
PSMC3P17980 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.29■■□□□ 1.96
PSMC3P17980 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.29■■□□□ 1.96
PSMC3P17980 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.29■■□□□ 1.96
PSMC3P17980 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PSMC3P17980 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.28■■□□□ 1.96
PSMC3P17980 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PSMC3P17980 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.27■■□□□ 1.96
PSMC3P17980 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
PSMC3P17980 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
PSMC3P17980 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PSMC3P17980 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.26■■□□□ 1.95
PSMC3P17980 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.26■■□□□ 1.95
PSMC3P17980 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.26■■□□□ 1.95
PSMC3P17980 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PSMC3P17980 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PSMC3P17980 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.24■■□□□ 1.95
PSMC3P17980 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
PSMC3P17980 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
PSMC3P17980 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.24■■□□□ 1.95
PSMC3P17980 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
PSMC3P17980 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PSMC3P17980 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PSMC3P17980 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PSMC3P17980 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PSMC3P17980 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PSMC3P17980 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PSMC3P17980 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.22■■□□□ 1.95
PSMC3P17980 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.22■■□□□ 1.95
PSMC3P17980 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
PSMC3P17980 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
PSMC3P17980 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
PSMC3P17980 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PSMC3P17980 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.19■■□□□ 1.94
PSMC3P17980 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PSMC3P17980 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PSMC3P17980 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PSMC3P17980 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PSMC3P17980 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.17■■□□□ 1.94
PSMC3P17980 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
PSMC3P17980 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
PSMC3P17980 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.16■■□□□ 1.94
PSMC3P17980 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PSMC3P17980 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms