Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFNA1P01562 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.82■□□□□ 0.92
IFNA1P01562 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFNA1P01562 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.82■□□□□ 0.92
IFNA1P01562 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFNA1P01562 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFNA1P01562 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IFNA1P01562 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFNA1P01562 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFNA1P01562 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IFNA1P01562 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.8■□□□□ 0.92
IFNA1P01562 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
IFNA1P01562 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
IFNA1P01562 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
IFNA1P01562 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFNA1P01562 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFNA1P01562 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFNA1P01562 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFNA1P01562 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFNA1P01562 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFNA1P01562 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFNA1P01562 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
IFNA1P01562 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.77■□□□□ 0.91
IFNA1P01562 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
IFNA1P01562 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IFNA1P01562 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IFNA1P01562 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
IFNA1P01562 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IFNA1P01562 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.74■□□□□ 0.91
IFNA1P01562 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.72■□□□□ 0.91
IFNA1P01562 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IFNA1P01562 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IFNA1P01562 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IFNA1P01562 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IFNA1P01562 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
IFNA1P01562 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.71■□□□□ 0.91
IFNA1P01562 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
IFNA1P01562 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IFNA1P01562 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
IFNA1P01562 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.7■□□□□ 0.9
IFNA1P01562 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IFNA1P01562 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IFNA1P01562 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IFNA1P01562 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
IFNA1P01562 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IFNA1P01562 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNA1P01562 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.68■□□□□ 0.9
IFNA1P01562 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IFNA1P01562 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
IFNA1P01562 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFNA1P01562 AL135925.1-201ENST00000605920 1701 ntBASIC20.67■□□□□ 0.9
IFNA1P01562 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
IFNA1P01562 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.67■□□□□ 0.9
IFNA1P01562 AC015813.7-201ENST00000623294 581 ntBASIC20.67■□□□□ 0.9
IFNA1P01562 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
IFNA1P01562 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IFNA1P01562 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNA1P01562 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.66■□□□□ 0.9
IFNA1P01562 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
IFNA1P01562 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNA1P01562 DRD5P2-201ENST00000421395 2012 ntBASIC20.66■□□□□ 0.9
IFNA1P01562 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFNA1P01562 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
IFNA1P01562 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IFNA1P01562 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNA1P01562 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IFNA1P01562 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
IFNA1P01562 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
IFNA1P01562 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IFNA1P01562 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IFNA1P01562 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IFNA1P01562 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNA1P01562 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.63■□□□□ 0.89
IFNA1P01562 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNA1P01562 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
IFNA1P01562 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
IFNA1P01562 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFNA1P01562 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IFNA1P01562 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.61■□□□□ 0.89
IFNA1P01562 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IFNA1P01562 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
IFNA1P01562 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
IFNA1P01562 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IFNA1P01562 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IFNA1P01562 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.58■□□□□ 0.89
IFNA1P01562 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.58■□□□□ 0.89
IFNA1P01562 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
IFNA1P01562 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IFNA1P01562 AL139393.2-201ENST00000608721 2025 ntBASIC20.56■□□□□ 0.88
IFNA1P01562 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IFNA1P01562 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IFNA1P01562 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
IFNA1P01562 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
IFNA1P01562 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
IFNA1P01562 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.52■□□□□ 0.88
IFNA1P01562 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IFNA1P01562 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
IFNA1P01562 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IFNA1P01562 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IFNA1P01562 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms