Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TGFAP01135 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.82■■□□□ 1.08
TGFAP01135 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TGFAP01135 AC120057.4-201ENST00000624722 1615 ntBASIC21.81■■□□□ 1.08
TGFAP01135 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
TGFAP01135 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TGFAP01135 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
TGFAP01135 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TGFAP01135 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TGFAP01135 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TGFAP01135 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.8■■□□□ 1.08
TGFAP01135 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.79■■□□□ 1.08
TGFAP01135 DUX4L13-201ENST00000554103 1267 ntBASIC21.78■■□□□ 1.08
TGFAP01135 DUX4L15-201ENST00000611059 1267 ntBASIC21.78■■□□□ 1.08
TGFAP01135 DUX4L23-201ENST00000615195 1269 ntBASIC21.78■■□□□ 1.08
TGFAP01135 DUX4L24-201ENST00000617576 1269 ntBASIC21.78■■□□□ 1.08
TGFAP01135 DUX4L22-201ENST00000618238 1269 ntBASIC21.78■■□□□ 1.08
TGFAP01135 DUX4L20-201ENST00000619712 1269 ntBASIC21.78■■□□□ 1.08
TGFAP01135 DUX4L21-201ENST00000622058 1269 ntBASIC21.78■■□□□ 1.08
TGFAP01135 DUX4L10-201ENST00000622460 1267 ntBASIC21.78■■□□□ 1.08
TGFAP01135 DUX4L25-201ENST00000624915 1269 ntBASIC21.78■■□□□ 1.08
TGFAP01135 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TGFAP01135 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.77■■□□□ 1.08
TGFAP01135 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.77■■□□□ 1.08
TGFAP01135 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TGFAP01135 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.76■■□□□ 1.07
TGFAP01135 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TGFAP01135 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TGFAP01135 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.75■■□□□ 1.07
TGFAP01135 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TGFAP01135 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.75■■□□□ 1.07
TGFAP01135 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TGFAP01135 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.74■■□□□ 1.07
TGFAP01135 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.74■■□□□ 1.07
TGFAP01135 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
TGFAP01135 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.72■■□□□ 1.07
TGFAP01135 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TGFAP01135 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.72■■□□□ 1.07
TGFAP01135 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TGFAP01135 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.71■■□□□ 1.07
TGFAP01135 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.71■■□□□ 1.07
TGFAP01135 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TGFAP01135 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.71■■□□□ 1.07
TGFAP01135 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TGFAP01135 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TGFAP01135 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TGFAP01135 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TGFAP01135 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TGFAP01135 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.7■■□□□ 1.06
TGFAP01135 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TGFAP01135 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TGFAP01135 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TGFAP01135 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TGFAP01135 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TGFAP01135 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TGFAP01135 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TGFAP01135 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TGFAP01135 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TGFAP01135 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.67■■□□□ 1.06
TGFAP01135 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.66■■□□□ 1.06
TGFAP01135 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TGFAP01135 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TGFAP01135 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TGFAP01135 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TGFAP01135 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TGFAP01135 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TGFAP01135 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.63■■□□□ 1.05
TGFAP01135 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TGFAP01135 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TGFAP01135 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.62■■□□□ 1.05
TGFAP01135 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.62■■□□□ 1.05
TGFAP01135 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.61■■□□□ 1.05
TGFAP01135 AL161658.1-201ENST00000623641 1967 ntBASIC21.61■■□□□ 1.05
TGFAP01135 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TGFAP01135 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TGFAP01135 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TGFAP01135 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.6■■□□□ 1.05
TGFAP01135 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.59■■□□□ 1.05
TGFAP01135 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.59■■□□□ 1.05
TGFAP01135 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TGFAP01135 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.58■■□□□ 1.05
TGFAP01135 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.58■■□□□ 1.05
TGFAP01135 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TGFAP01135 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TGFAP01135 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TGFAP01135 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TGFAP01135 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TGFAP01135 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TGFAP01135 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TGFAP01135 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TGFAP01135 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TGFAP01135 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TGFAP01135 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TGFAP01135 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.57■■□□□ 1.04
TGFAP01135 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TGFAP01135 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TGFAP01135 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TGFAP01135 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TGFAP01135 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TGFAP01135 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms