Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CSPG5O95196 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CSPG5O95196 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
CSPG5O95196 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.36■■■□□ 2.13
CSPG5O95196 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.36■■■□□ 2.13
CSPG5O95196 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.36■■■□□ 2.13
CSPG5O95196 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CSPG5O95196 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CSPG5O95196 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.34■■■□□ 2.13
CSPG5O95196 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CSPG5O95196 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CSPG5O95196 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CSPG5O95196 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CSPG5O95196 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CSPG5O95196 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.33■■■□□ 2.13
CSPG5O95196 DUX4L13-201ENST00000554103 1267 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L15-201ENST00000611059 1267 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L23-201ENST00000615195 1269 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L24-201ENST00000617576 1269 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L22-201ENST00000618238 1269 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L20-201ENST00000619712 1269 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L21-201ENST00000622058 1269 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L10-201ENST00000622460 1267 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L25-201ENST00000624915 1269 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CSPG5O95196 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CSPG5O95196 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CSPG5O95196 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.31■■■□□ 2.12
CSPG5O95196 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.3■■■□□ 2.12
CSPG5O95196 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CSPG5O95196 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.29■■■□□ 2.12
CSPG5O95196 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CSPG5O95196 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.27■■■□□ 2.12
CSPG5O95196 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.27■■■□□ 2.12
CSPG5O95196 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CSPG5O95196 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.26■■■□□ 2.11
CSPG5O95196 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CSPG5O95196 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.25■■■□□ 2.11
CSPG5O95196 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CSPG5O95196 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
CSPG5O95196 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
CSPG5O95196 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.24■■■□□ 2.11
CSPG5O95196 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CSPG5O95196 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
CSPG5O95196 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
CSPG5O95196 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CSPG5O95196 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.22■■■□□ 2.11
CSPG5O95196 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
CSPG5O95196 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
CSPG5O95196 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CSPG5O95196 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.21■■■□□ 2.11
CSPG5O95196 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.2■■■□□ 2.1
CSPG5O95196 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CSPG5O95196 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.18■■■□□ 2.1
CSPG5O95196 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
CSPG5O95196 AC120057.4-201ENST00000624722 1615 ntBASIC28.18■■■□□ 2.1
CSPG5O95196 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CSPG5O95196 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CSPG5O95196 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CSPG5O95196 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
CSPG5O95196 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.16■■■□□ 2.1
CSPG5O95196 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 RARRES2P2-201ENST00000394842 485 ntBASIC28.15■■■□□ 2.1
CSPG5O95196 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.15■■■□□ 2.1
CSPG5O95196 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CSPG5O95196 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
CSPG5O95196 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.13■■■□□ 2.09
CSPG5O95196 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CSPG5O95196 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CSPG5O95196 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CSPG5O95196 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CSPG5O95196 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
CSPG5O95196 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CSPG5O95196 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.1■■■□□ 2.09
CSPG5O95196 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CSPG5O95196 GPX1-201ENST00000419349 1106 ntBASIC28.09■■■□□ 2.09
CSPG5O95196 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.09■■■□□ 2.09
CSPG5O95196 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.08■■■□□ 2.09
CSPG5O95196 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
CSPG5O95196 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CSPG5O95196 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
CSPG5O95196 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
CSPG5O95196 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CSPG5O95196 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CSPG5O95196 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
CSPG5O95196 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
CSPG5O95196 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.05■■■□□ 2.08
CSPG5O95196 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.05■■■□□ 2.08
CSPG5O95196 ABHD17AP5-201ENST00000580133 923 ntBASIC28.05■■■□□ 2.08
CSPG5O95196 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms