Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC35.79■■■■□ 3.32
LTN1O94822 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
LTN1O94822 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
LTN1O94822 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
LTN1O94822 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
LTN1O94822 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
LTN1O94822 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC35.75■■■■□ 3.31
LTN1O94822 CALM3-209ENST00000597743 577 ntTSL 4 BASIC35.74■■■■□ 3.31
LTN1O94822 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC35.74■■■■□ 3.31
LTN1O94822 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC35.73■■■■□ 3.31
LTN1O94822 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
LTN1O94822 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
LTN1O94822 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC35.71■■■■□ 3.31
LTN1O94822 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC35.69■■■■□ 3.3
LTN1O94822 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC35.69■■■■□ 3.3
LTN1O94822 HSD17B1P1-201ENST00000590052 955 ntBASIC35.69■■■■□ 3.3
LTN1O94822 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
LTN1O94822 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC35.66■■■■□ 3.3
LTN1O94822 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
LTN1O94822 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC35.66■■■■□ 3.3
LTN1O94822 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
LTN1O94822 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC35.65■■■■□ 3.3
LTN1O94822 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC35.65■■■■□ 3.3
LTN1O94822 EI24-212ENST00000615917 1407 ntTSL 2 BASIC35.64■■■■□ 3.3
LTN1O94822 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
LTN1O94822 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC35.63■■■■□ 3.29
LTN1O94822 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC35.63■■■■□ 3.29
LTN1O94822 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC35.62■■■■□ 3.29
LTN1O94822 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC35.62■■■■□ 3.29
LTN1O94822 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC35.61■■■■□ 3.29
LTN1O94822 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
LTN1O94822 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L13-201ENST00000554103 1267 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L15-201ENST00000611059 1267 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L23-201ENST00000615195 1269 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L24-201ENST00000617576 1269 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L22-201ENST00000618238 1269 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L20-201ENST00000619712 1269 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L21-201ENST00000622058 1269 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L10-201ENST00000622460 1267 ntBASIC35.59■■■■□ 3.29
LTN1O94822 DUX4L25-201ENST00000624915 1269 ntBASIC35.59■■■■□ 3.29
LTN1O94822 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC35.59■■■■□ 3.29
LTN1O94822 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
LTN1O94822 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
LTN1O94822 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC35.58■■■■□ 3.29
LTN1O94822 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC35.56■■■■□ 3.28
LTN1O94822 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
LTN1O94822 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
LTN1O94822 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
LTN1O94822 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
LTN1O94822 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC35.55■■■■□ 3.28
LTN1O94822 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
LTN1O94822 AL161658.1-201ENST00000623641 1967 ntBASIC35.53■■■■□ 3.28
LTN1O94822 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
LTN1O94822 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC35.52■■■■□ 3.28
LTN1O94822 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC35.52■■■■□ 3.28
LTN1O94822 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
LTN1O94822 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
LTN1O94822 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC35.51■■■■□ 3.27
LTN1O94822 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
LTN1O94822 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC35.5■■■■□ 3.27
LTN1O94822 BRD4-212ENST00000630599 726 ntTSL 2 BASIC35.5■■■■□ 3.27
LTN1O94822 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC35.49■■■■□ 3.27
LTN1O94822 METRNL-202ENST00000570778 967 ntTSL 5 BASIC35.49■■■■□ 3.27
LTN1O94822 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC35.48■■■■□ 3.27
LTN1O94822 LINC00273-201ENST00000539813 1452 ntBASIC35.47■■■■□ 3.27
LTN1O94822 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
LTN1O94822 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC35.46■■■■□ 3.27
LTN1O94822 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC35.46■■■■□ 3.27
LTN1O94822 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC35.46■■■■□ 3.27
LTN1O94822 CHML-204ENST00000638121 920 ntTSL 2 BASIC35.45■■■■□ 3.27
LTN1O94822 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
LTN1O94822 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC35.44■■■■□ 3.26
LTN1O94822 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC35.42■■■■□ 3.26
LTN1O94822 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
LTN1O94822 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
LTN1O94822 AC010864.1-201ENST00000609407 1511 ntBASIC35.4■■■■□ 3.26
LTN1O94822 HES6-205ENST00000409356 528 ntTSL 2 BASIC35.38■■■■□ 3.25
LTN1O94822 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC35.38■■■■□ 3.25
LTN1O94822 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
LTN1O94822 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
LTN1O94822 ABHD17AP3-201ENST00000503096 1137 ntBASIC35.38■■■■□ 3.25
LTN1O94822 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC35.37■■■■□ 3.25
LTN1O94822 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
LTN1O94822 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC35.35■■■■□ 3.25
LTN1O94822 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC35.34■■■■□ 3.25
LTN1O94822 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
LTN1O94822 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
LTN1O94822 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
LTN1O94822 SRP68-213ENST00000629930 165 ntTSL 5 BASIC35.32■■■■□ 3.24
LTN1O94822 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
LTN1O94822 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC35.31■■■■□ 3.24
LTN1O94822 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC35.31■■■■□ 3.24
LTN1O94822 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
LTN1O94822 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC35.3■■■■□ 3.24
LTN1O94822 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC35.29■■■■□ 3.24
LTN1O94822 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
LTN1O94822 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
LTN1O94822 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC35.29■■■■□ 3.24
LTN1O94822 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms