Protein–RNA interactions for Protein: O75679

RFPL3, Ret finger protein-like 3, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3O75679 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFPL3O75679 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFPL3O75679 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.73■■□□□ 1.71
RFPL3O75679 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.73■■□□□ 1.71
RFPL3O75679 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.73■■□□□ 1.71
RFPL3O75679 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
RFPL3O75679 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFPL3O75679 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RFPL3O75679 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RFPL3O75679 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
RFPL3O75679 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RFPL3O75679 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RFPL3O75679 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RFPL3O75679 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
RFPL3O75679 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RFPL3O75679 DUX4L13-201ENST00000554103 1267 ntBASIC25.69■■□□□ 1.7
RFPL3O75679 DUX4L15-201ENST00000611059 1267 ntBASIC25.69■■□□□ 1.7
RFPL3O75679 DUX4L23-201ENST00000615195 1269 ntBASIC25.69■■□□□ 1.7
RFPL3O75679 DUX4L24-201ENST00000617576 1269 ntBASIC25.69■■□□□ 1.7
RFPL3O75679 DUX4L22-201ENST00000618238 1269 ntBASIC25.69■■□□□ 1.7
RFPL3O75679 DUX4L20-201ENST00000619712 1269 ntBASIC25.69■■□□□ 1.7
RFPL3O75679 DUX4L21-201ENST00000622058 1269 ntBASIC25.69■■□□□ 1.7
RFPL3O75679 DUX4L10-201ENST00000622460 1267 ntBASIC25.69■■□□□ 1.7
RFPL3O75679 DUX4L25-201ENST00000624915 1269 ntBASIC25.69■■□□□ 1.7
RFPL3O75679 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RFPL3O75679 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RFPL3O75679 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.68■■□□□ 1.7
RFPL3O75679 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.67■■□□□ 1.7
RFPL3O75679 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.66■■□□□ 1.7
RFPL3O75679 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RFPL3O75679 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
RFPL3O75679 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.66■■□□□ 1.7
RFPL3O75679 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.65■■□□□ 1.7
RFPL3O75679 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RFPL3O75679 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
RFPL3O75679 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RFPL3O75679 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
RFPL3O75679 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.64■■□□□ 1.7
RFPL3O75679 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
RFPL3O75679 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.64■■□□□ 1.69
RFPL3O75679 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.63■■□□□ 1.69
RFPL3O75679 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.63■■□□□ 1.69
RFPL3O75679 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.62■■□□□ 1.69
RFPL3O75679 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.62■■□□□ 1.69
RFPL3O75679 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RFPL3O75679 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.62■■□□□ 1.69
RFPL3O75679 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RFPL3O75679 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.61■■□□□ 1.69
RFPL3O75679 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RFPL3O75679 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.6■■□□□ 1.69
RFPL3O75679 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.6■■□□□ 1.69
RFPL3O75679 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
RFPL3O75679 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.6■■□□□ 1.69
RFPL3O75679 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.6■■□□□ 1.69
RFPL3O75679 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RFPL3O75679 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RFPL3O75679 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RFPL3O75679 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RFPL3O75679 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.57■■□□□ 1.68
RFPL3O75679 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.57■■□□□ 1.68
RFPL3O75679 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
RFPL3O75679 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.56■■□□□ 1.68
RFPL3O75679 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RFPL3O75679 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
RFPL3O75679 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.54■■□□□ 1.68
RFPL3O75679 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RFPL3O75679 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RFPL3O75679 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RFPL3O75679 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RFPL3O75679 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.51■■□□□ 1.67
RFPL3O75679 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RFPL3O75679 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RFPL3O75679 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RFPL3O75679 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RFPL3O75679 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RFPL3O75679 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RFPL3O75679 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RFPL3O75679 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
RFPL3O75679 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
RFPL3O75679 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
RFPL3O75679 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RFPL3O75679 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RFPL3O75679 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RFPL3O75679 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
RFPL3O75679 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.47■■□□□ 1.67
RFPL3O75679 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RFPL3O75679 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
RFPL3O75679 RARRES2P2-201ENST00000394842 485 ntBASIC25.46■■□□□ 1.67
RFPL3O75679 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.46■■□□□ 1.67
RFPL3O75679 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RFPL3O75679 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.45■■□□□ 1.66
RFPL3O75679 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RFPL3O75679 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RFPL3O75679 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.44■■□□□ 1.66
RFPL3O75679 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.44■■□□□ 1.66
RFPL3O75679 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RFPL3O75679 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RFPL3O75679 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RFPL3O75679 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.42■■□□□ 1.66
RFPL3O75679 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms