Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 AL031258.1-201ENST00000623562 325 ntBASIC19.6■□□□□ 0.73
SH2D1AO60880 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH2D1AO60880 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.59■□□□□ 0.73
SH2D1AO60880 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.58■□□□□ 0.72
SH2D1AO60880 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
SH2D1AO60880 DRD5P2-201ENST00000421395 2012 ntBASIC19.57■□□□□ 0.72
SH2D1AO60880 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SH2D1AO60880 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SH2D1AO60880 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH2D1AO60880 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SH2D1AO60880 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SH2D1AO60880 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SH2D1AO60880 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D1AO60880 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D1AO60880 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D1AO60880 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D1AO60880 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.52■□□□□ 0.72
SH2D1AO60880 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SH2D1AO60880 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.51■□□□□ 0.71
SH2D1AO60880 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH2D1AO60880 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SH2D1AO60880 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SH2D1AO60880 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.49■□□□□ 0.71
SH2D1AO60880 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D1AO60880 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D1AO60880 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SH2D1AO60880 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D1AO60880 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH2D1AO60880 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH2D1AO60880 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.47■□□□□ 0.71
SH2D1AO60880 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH2D1AO60880 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SH2D1AO60880 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.47■□□□□ 0.71
SH2D1AO60880 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SH2D1AO60880 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SH2D1AO60880 AL121749.1-202ENST00000609313 2153 ntBASIC19.46■□□□□ 0.71
SH2D1AO60880 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SH2D1AO60880 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SH2D1AO60880 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SH2D1AO60880 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.45■□□□□ 0.7
SH2D1AO60880 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.45■□□□□ 0.7
SH2D1AO60880 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH2D1AO60880 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH2D1AO60880 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH2D1AO60880 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D1AO60880 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D1AO60880 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D1AO60880 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SH2D1AO60880 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D1AO60880 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SH2D1AO60880 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D1AO60880 WASH5P-204ENST00000632292 975 ntBASIC19.43■□□□□ 0.7
SH2D1AO60880 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH2D1AO60880 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SH2D1AO60880 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH2D1AO60880 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH2D1AO60880 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH2D1AO60880 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SH2D1AO60880 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH2D1AO60880 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH2D1AO60880 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SH2D1AO60880 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SH2D1AO60880 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH2D1AO60880 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH2D1AO60880 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH2D1AO60880 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SH2D1AO60880 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SH2D1AO60880 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH2D1AO60880 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH2D1AO60880 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH2D1AO60880 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.39■□□□□ 0.69
SH2D1AO60880 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH2D1AO60880 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SH2D1AO60880 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SH2D1AO60880 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.37■□□□□ 0.69
SH2D1AO60880 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
SH2D1AO60880 AC010864.1-201ENST00000609407 1511 ntBASIC19.35■□□□□ 0.69
SH2D1AO60880 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.35■□□□□ 0.69
SH2D1AO60880 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH2D1AO60880 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.35■□□□□ 0.69
SH2D1AO60880 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH2D1AO60880 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH2D1AO60880 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH2D1AO60880 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH2D1AO60880 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SH2D1AO60880 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.34■□□□□ 0.69
SH2D1AO60880 AP002365.1-201ENST00000603448 772 ntBASIC19.34■□□□□ 0.69
SH2D1AO60880 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.34■□□□□ 0.69
SH2D1AO60880 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.34■□□□□ 0.69
SH2D1AO60880 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH2D1AO60880 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
SH2D1AO60880 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH2D1AO60880 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.34■□□□□ 0.69
SH2D1AO60880 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SH2D1AO60880 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SH2D1AO60880 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SH2D1AO60880 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D1AO60880 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D1AO60880 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D1AO60880 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms