Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TSPAN3O60637 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
TSPAN3O60637 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TSPAN3O60637 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.23■■□□□ 1.95
TSPAN3O60637 AC021231.2-201ENST00000594613 730 ntBASIC27.23■■□□□ 1.95
TSPAN3O60637 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TSPAN3O60637 MIR7108-201ENST00000614319 87 ntBASIC27.22■■□□□ 1.95
TSPAN3O60637 ZNRF2P2-203ENST00000454624 420 ntBASIC27.21■■□□□ 1.95
TSPAN3O60637 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.21■■□□□ 1.95
TSPAN3O60637 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TSPAN3O60637 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TSPAN3O60637 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
TSPAN3O60637 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
TSPAN3O60637 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.17■■□□□ 1.94
TSPAN3O60637 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TSPAN3O60637 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TSPAN3O60637 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.16■■□□□ 1.94
TSPAN3O60637 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.16■■□□□ 1.94
TSPAN3O60637 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.16■■□□□ 1.94
TSPAN3O60637 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TSPAN3O60637 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
TSPAN3O60637 AC010864.1-201ENST00000609407 1511 ntBASIC27.15■■□□□ 1.94
TSPAN3O60637 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TSPAN3O60637 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TSPAN3O60637 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.14■■□□□ 1.93
TSPAN3O60637 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
TSPAN3O60637 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.13■■□□□ 1.93
TSPAN3O60637 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TSPAN3O60637 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
TSPAN3O60637 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.12■■□□□ 1.93
TSPAN3O60637 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.12■■□□□ 1.93
TSPAN3O60637 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TSPAN3O60637 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TSPAN3O60637 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
TSPAN3O60637 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.09■■□□□ 1.93
TSPAN3O60637 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TSPAN3O60637 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
TSPAN3O60637 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TSPAN3O60637 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.07■■□□□ 1.92
TSPAN3O60637 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TSPAN3O60637 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
TSPAN3O60637 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.07■■□□□ 1.92
TSPAN3O60637 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TSPAN3O60637 AL135925.1-201ENST00000605920 1701 ntBASIC27.05■■□□□ 1.92
TSPAN3O60637 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TSPAN3O60637 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TSPAN3O60637 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TSPAN3O60637 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.05■■□□□ 1.92
TSPAN3O60637 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TSPAN3O60637 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
TSPAN3O60637 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TSPAN3O60637 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TSPAN3O60637 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
TSPAN3O60637 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.02■■□□□ 1.92
TSPAN3O60637 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TSPAN3O60637 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.01■■□□□ 1.91
TSPAN3O60637 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
TSPAN3O60637 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
TSPAN3O60637 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
TSPAN3O60637 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.91
TSPAN3O60637 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TSPAN3O60637 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.99■■□□□ 1.91
TSPAN3O60637 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
TSPAN3O60637 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.97■■□□□ 1.91
TSPAN3O60637 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TSPAN3O60637 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TSPAN3O60637 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TSPAN3O60637 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
TSPAN3O60637 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
TSPAN3O60637 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
TSPAN3O60637 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TSPAN3O60637 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
TSPAN3O60637 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
TSPAN3O60637 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.93■■□□□ 1.9
TSPAN3O60637 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.93■■□□□ 1.9
TSPAN3O60637 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
TSPAN3O60637 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
TSPAN3O60637 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.91■■□□□ 1.9
TSPAN3O60637 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
TSPAN3O60637 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TSPAN3O60637 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
TSPAN3O60637 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TSPAN3O60637 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TSPAN3O60637 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TSPAN3O60637 HLA-V-202ENST00000446817 847 ntBASIC26.88■■□□□ 1.89
TSPAN3O60637 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.88■■□□□ 1.89
TSPAN3O60637 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TSPAN3O60637 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.87■■□□□ 1.89
TSPAN3O60637 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.87■■□□□ 1.89
TSPAN3O60637 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.87■■□□□ 1.89
TSPAN3O60637 LINC01971-201ENST00000617888 1048 ntBASIC26.87■■□□□ 1.89
TSPAN3O60637 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TSPAN3O60637 AC127502.1-201ENST00000399971 1502 ntBASIC26.86■■□□□ 1.89
TSPAN3O60637 DUX4L11-201ENST00000611504 1267 ntBASIC26.86■■□□□ 1.89
TSPAN3O60637 DUX4L12-201ENST00000614593 1267 ntBASIC26.86■■□□□ 1.89
TSPAN3O60637 DUX4L14-201ENST00000621227 1267 ntBASIC26.86■■□□□ 1.89
TSPAN3O60637 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.85■■□□□ 1.89
TSPAN3O60637 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.85■■□□□ 1.89
TSPAN3O60637 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.85■■□□□ 1.89
TSPAN3O60637 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms