Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6DO43924 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6DO43924 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6DO43924 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6DO43924 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDE6DO43924 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDE6DO43924 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PDE6DO43924 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6DO43924 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6DO43924 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PDE6DO43924 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6DO43924 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6DO43924 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.37■□□□□ 0.85
PDE6DO43924 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6DO43924 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PDE6DO43924 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDE6DO43924 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDE6DO43924 AL139393.2-201ENST00000608721 2025 ntBASIC20.36■□□□□ 0.85
PDE6DO43924 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PDE6DO43924 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDE6DO43924 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6DO43924 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6DO43924 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PDE6DO43924 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6DO43924 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PDE6DO43924 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE6DO43924 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.33■□□□□ 0.85
PDE6DO43924 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.33■□□□□ 0.85
PDE6DO43924 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.33■□□□□ 0.85
PDE6DO43924 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDE6DO43924 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PDE6DO43924 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDE6DO43924 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6DO43924 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6DO43924 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.31■□□□□ 0.84
PDE6DO43924 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PDE6DO43924 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.31■□□□□ 0.84
PDE6DO43924 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6DO43924 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PDE6DO43924 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6DO43924 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
PDE6DO43924 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6DO43924 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDE6DO43924 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6DO43924 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
PDE6DO43924 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6DO43924 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6DO43924 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6DO43924 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6DO43924 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.25■□□□□ 0.83
PDE6DO43924 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6DO43924 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6DO43924 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6DO43924 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PDE6DO43924 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6DO43924 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6DO43924 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6DO43924 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.23■□□□□ 0.83
PDE6DO43924 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6DO43924 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6DO43924 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDE6DO43924 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDE6DO43924 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDE6DO43924 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDE6DO43924 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.21■□□□□ 0.83
PDE6DO43924 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
PDE6DO43924 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDE6DO43924 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.2■□□□□ 0.82
PDE6DO43924 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6DO43924 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PDE6DO43924 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6DO43924 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6DO43924 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PDE6DO43924 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.19■□□□□ 0.82
PDE6DO43924 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6DO43924 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
PDE6DO43924 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PDE6DO43924 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6DO43924 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6DO43924 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6DO43924 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6DO43924 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.16■□□□□ 0.82
PDE6DO43924 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.16■□□□□ 0.82
PDE6DO43924 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6DO43924 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6DO43924 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6DO43924 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PDE6DO43924 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6DO43924 BX255925.1-201ENST00000566954 1854 ntBASIC20.14■□□□□ 0.81
PDE6DO43924 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6DO43924 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PDE6DO43924 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDE6DO43924 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6DO43924 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE6DO43924 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PDE6DO43924 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6DO43924 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6DO43924 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDE6DO43924 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.11■□□□□ 0.81
PDE6DO43924 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms