Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
NCK2O43639 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
NCK2O43639 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
NCK2O43639 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
NCK2O43639 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.94■■■□□ 2.22
NCK2O43639 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
NCK2O43639 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
NCK2O43639 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.92■■■□□ 2.22
NCK2O43639 ABCB10P3-201ENST00000561950 2166 ntBASIC28.92■■■□□ 2.22
NCK2O43639 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.91■■■□□ 2.22
NCK2O43639 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.91■■■□□ 2.22
NCK2O43639 AC021231.2-201ENST00000594613 730 ntBASIC28.91■■■□□ 2.22
NCK2O43639 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
NCK2O43639 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.9■■■□□ 2.22
NCK2O43639 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
NCK2O43639 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
NCK2O43639 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
NCK2O43639 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
NCK2O43639 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
NCK2O43639 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
NCK2O43639 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.88■■■□□ 2.21
NCK2O43639 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
NCK2O43639 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.87■■■□□ 2.21
NCK2O43639 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.87■■■□□ 2.21
NCK2O43639 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
NCK2O43639 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
NCK2O43639 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
NCK2O43639 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
NCK2O43639 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
NCK2O43639 MIR3648-2-201ENST00000581792 180 ntBASIC28.85■■■□□ 2.21
NCK2O43639 MIR3648-1-201ENST00000615959 180 ntBASIC28.85■■■□□ 2.21
NCK2O43639 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
NCK2O43639 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
NCK2O43639 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.84■■■□□ 2.21
NCK2O43639 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.83■■■□□ 2.21
NCK2O43639 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
NCK2O43639 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.82■■■□□ 2.2
NCK2O43639 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
NCK2O43639 HSD17B1P1-201ENST00000590052 955 ntBASIC28.82■■■□□ 2.2
NCK2O43639 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.81■■■□□ 2.2
NCK2O43639 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.81■■■□□ 2.2
NCK2O43639 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
NCK2O43639 AC016575.1-201ENST00000607026 382 ntBASIC28.8■■■□□ 2.2
NCK2O43639 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.8■■■□□ 2.2
NCK2O43639 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NCK2O43639 AC139426.1-201ENST00000568218 2529 ntBASIC28.8■■■□□ 2.2
NCK2O43639 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NCK2O43639 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.79■■■□□ 2.2
NCK2O43639 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.78■■■□□ 2.2
NCK2O43639 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
NCK2O43639 AC108673.1-201ENST00000510422 1159 ntBASIC28.78■■■□□ 2.2
NCK2O43639 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
NCK2O43639 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.77■■■□□ 2.2
NCK2O43639 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
NCK2O43639 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.77■■■□□ 2.2
NCK2O43639 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.77■■■□□ 2.2
NCK2O43639 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
NCK2O43639 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
NCK2O43639 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
NCK2O43639 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
NCK2O43639 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.74■■■□□ 2.19
NCK2O43639 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
NCK2O43639 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
NCK2O43639 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
NCK2O43639 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
NCK2O43639 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.71■■■□□ 2.19
NCK2O43639 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
NCK2O43639 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
NCK2O43639 LINC01971-201ENST00000617888 1048 ntBASIC28.7■■■□□ 2.18
NCK2O43639 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
NCK2O43639 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.68■■■□□ 2.18
NCK2O43639 DUX4L11-201ENST00000611504 1267 ntBASIC28.68■■■□□ 2.18
NCK2O43639 DUX4L12-201ENST00000614593 1267 ntBASIC28.68■■■□□ 2.18
NCK2O43639 DUX4L14-201ENST00000621227 1267 ntBASIC28.68■■■□□ 2.18
NCK2O43639 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
NCK2O43639 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
NCK2O43639 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.67■■■□□ 2.18
NCK2O43639 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
NCK2O43639 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
NCK2O43639 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
NCK2O43639 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
NCK2O43639 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
NCK2O43639 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
NCK2O43639 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
NCK2O43639 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
NCK2O43639 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NCK2O43639 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NCK2O43639 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
NCK2O43639 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
NCK2O43639 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
NCK2O43639 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.61■■■□□ 2.17
NCK2O43639 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.61■■■□□ 2.17
NCK2O43639 CR559946.2-201ENST00000623684 991 ntBASIC28.61■■■□□ 2.17
NCK2O43639 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.6■■■□□ 2.17
NCK2O43639 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
NCK2O43639 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.6■■■□□ 2.17
NCK2O43639 MIR6090-201ENST00000622481 60 ntBASIC28.6■■■□□ 2.17
NCK2O43639 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
NCK2O43639 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
NCK2O43639 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms