Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI2O43623 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI2O43623 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI2O43623 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI2O43623 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.42■□□□□ 0.7
SNAI2O43623 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SNAI2O43623 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAI2O43623 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAI2O43623 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SNAI2O43623 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.4■□□□□ 0.7
SNAI2O43623 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.39■□□□□ 0.7
SNAI2O43623 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNAI2O43623 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAI2O43623 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAI2O43623 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SNAI2O43623 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAI2O43623 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAI2O43623 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SNAI2O43623 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAI2O43623 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAI2O43623 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
SNAI2O43623 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNAI2O43623 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNAI2O43623 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNAI2O43623 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.36■□□□□ 0.69
SNAI2O43623 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNAI2O43623 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNAI2O43623 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.36■□□□□ 0.69
SNAI2O43623 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNAI2O43623 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNAI2O43623 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNAI2O43623 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SNAI2O43623 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNAI2O43623 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNAI2O43623 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.35■□□□□ 0.69
SNAI2O43623 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAI2O43623 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SNAI2O43623 AL031258.1-201ENST00000623562 325 ntBASIC19.33■□□□□ 0.68
SNAI2O43623 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNAI2O43623 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SNAI2O43623 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNAI2O43623 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNAI2O43623 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNAI2O43623 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNAI2O43623 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNAI2O43623 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNAI2O43623 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNAI2O43623 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.3■□□□□ 0.68
SNAI2O43623 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNAI2O43623 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNAI2O43623 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.28■□□□□ 0.68
SNAI2O43623 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNAI2O43623 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.27■□□□□ 0.68
SNAI2O43623 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SNAI2O43623 AL139393.2-201ENST00000608721 2025 ntBASIC19.27■□□□□ 0.67
SNAI2O43623 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNAI2O43623 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.25■□□□□ 0.67
SNAI2O43623 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNAI2O43623 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.25■□□□□ 0.67
SNAI2O43623 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNAI2O43623 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNAI2O43623 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNAI2O43623 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SNAI2O43623 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAI2O43623 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAI2O43623 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.22■□□□□ 0.67
SNAI2O43623 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAI2O43623 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAI2O43623 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAI2O43623 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAI2O43623 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAI2O43623 DRD5P2-201ENST00000421395 2012 ntBASIC19.2■□□□□ 0.66
SNAI2O43623 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAI2O43623 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.2■□□□□ 0.66
SNAI2O43623 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNAI2O43623 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI2O43623 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI2O43623 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI2O43623 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.19■□□□□ 0.66
SNAI2O43623 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.19■□□□□ 0.66
SNAI2O43623 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI2O43623 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI2O43623 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI2O43623 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNAI2O43623 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAI2O43623 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAI2O43623 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.16■□□□□ 0.66
SNAI2O43623 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNAI2O43623 WASH5P-204ENST00000632292 975 ntBASIC19.15■□□□□ 0.66
SNAI2O43623 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SNAI2O43623 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
SNAI2O43623 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNAI2O43623 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNAI2O43623 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNAI2O43623 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNAI2O43623 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNAI2O43623 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNAI2O43623 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNAI2O43623 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
SNAI2O43623 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms