Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFA4O00483 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFA4O00483 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFA4O00483 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NDUFA4O00483 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFA4O00483 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFA4O00483 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.15■□□□□ 0.82
NDUFA4O00483 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NDUFA4O00483 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFA4O00483 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFA4O00483 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFA4O00483 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFA4O00483 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFA4O00483 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFA4O00483 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA4O00483 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA4O00483 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA4O00483 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA4O00483 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA4O00483 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA4O00483 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA4O00483 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFA4O00483 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFA4O00483 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
NDUFA4O00483 AP006261.1-201ENST00000584783 668 ntBASIC20.12■□□□□ 0.81
NDUFA4O00483 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFA4O00483 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFA4O00483 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFA4O00483 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFA4O00483 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFA4O00483 MIR3665-201ENST00000578708 105 ntBASIC20.11■□□□□ 0.81
NDUFA4O00483 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.11■□□□□ 0.81
NDUFA4O00483 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFA4O00483 ABCB10P3-201ENST00000561950 2166 ntBASIC20.11■□□□□ 0.81
NDUFA4O00483 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.1■□□□□ 0.81
NDUFA4O00483 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NDUFA4O00483 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
NDUFA4O00483 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
NDUFA4O00483 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NDUFA4O00483 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NDUFA4O00483 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
NDUFA4O00483 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NDUFA4O00483 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NDUFA4O00483 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NDUFA4O00483 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NDUFA4O00483 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NDUFA4O00483 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
NDUFA4O00483 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFA4O00483 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFA4O00483 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.07■□□□□ 0.8
NDUFA4O00483 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFA4O00483 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.07■□□□□ 0.8
NDUFA4O00483 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NDUFA4O00483 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.06■□□□□ 0.8
NDUFA4O00483 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFA4O00483 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.06■□□□□ 0.8
NDUFA4O00483 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.06■□□□□ 0.8
NDUFA4O00483 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.06■□□□□ 0.8
NDUFA4O00483 DUX4L28-201ENST00000623687 678 ntBASIC20.06■□□□□ 0.8
NDUFA4O00483 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFA4O00483 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDUFA4O00483 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NDUFA4O00483 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
NDUFA4O00483 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NDUFA4O00483 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.04■□□□□ 0.8
NDUFA4O00483 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NDUFA4O00483 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NDUFA4O00483 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.03■□□□□ 0.8
NDUFA4O00483 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFA4O00483 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.03■□□□□ 0.8
NDUFA4O00483 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFA4O00483 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NDUFA4O00483 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFA4O00483 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NDUFA4O00483 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFA4O00483 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.01■□□□□ 0.79
NDUFA4O00483 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.01■□□□□ 0.79
NDUFA4O00483 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20■□□□□ 0.79
NDUFA4O00483 AC108673.1-201ENST00000510422 1159 ntBASIC20■□□□□ 0.79
NDUFA4O00483 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFA4O00483 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.99■□□□□ 0.79
NDUFA4O00483 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFA4O00483 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFA4O00483 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFA4O00483 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFA4O00483 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFA4O00483 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NDUFA4O00483 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NDUFA4O00483 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NDUFA4O00483 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.97■□□□□ 0.79
NDUFA4O00483 AL139393.2-201ENST00000608721 2025 ntBASIC19.97■□□□□ 0.79
NDUFA4O00483 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFA4O00483 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NDUFA4O00483 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFA4O00483 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.96■□□□□ 0.79
NDUFA4O00483 AL162393.1-201ENST00000437852 946 ntBASIC19.96■□□□□ 0.79
NDUFA4O00483 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
NDUFA4O00483 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.95■□□□□ 0.78
NDUFA4O00483 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.95■□□□□ 0.78
NDUFA4O00483 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms